RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 ZNF549Q6P9A3 640 aa15.83■□□□□ 0.12
LDLR-204ENST00000545707 ZBTB49Q6ZSB9 765 aa15.83■□□□□ 0.12
LDLR-204ENST00000545707 PGBD5Q8N414 524 aa15.83■□□□□ 0.12
LDLR-204ENST00000545707 TRIML2Q8N7C3 387 aa15.83■□□□□ 0.12
LDLR-204ENST00000545707 PTGR2Q8N8N7 351 aaPredicted RBP15.83■□□□□ 0.12
LDLR-204ENST00000545707 RSPH1Q8WYR4 309 aa15.83■□□□□ 0.12
LDLR-204ENST00000545707 TSPAN17Q96FV3 270 aa15.83■□□□□ 0.12
LDLR-204ENST00000545707 ARNT2Q9HBZ2 717 aa15.83■□□□□ 0.12
LDLR-204ENST00000545707 POLR3BQ9NW08 1133 aaPredicted RBP15.83■□□□□ 0.12
LDLR-204ENST00000545707 PLK2Q9NYY3 685 aa15.83■□□□□ 0.12
LDLR-204ENST00000545707 MAP10Q9P2G4 905 aa15.83■□□□□ 0.12
LDLR-204ENST00000545707 AURKCQ9UQB9 309 aa15.83■□□□□ 0.12
LDLR-204ENST00000545707 BTRCQ9Y297 605 aa15.83■□□□□ 0.12
LDLR-204ENST00000545707 ARL5AQ9Y689 179 aa15.83■□□□□ 0.12
LDLR-204ENST00000545707 PDLIM1O00151 329 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 HOXC8P31273 242 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 NR1H2P55055 460 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 ECT2LQ008S8 904 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 SLC39A12Q504Y0 691 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 SPPL2CQ8IUH8 684 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 NUP93Q8N1F7 819 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 BLOC1S5Q8TDH9 187 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 KATNAL1Q9BW62 490 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 ATP13A1Q9HD20 1204 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 MID1IP1Q9NPA3 183 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 DMTF1Q9Y222 760 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 CEPT1Q9Y6K0 416 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 hCG_2014768A0A024R1R8 64 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 A0A0J9YYE9 177 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 NME4O00746 187 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 PIP5K1BO14986 540 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 HNRNPRO43390 633 aaKnown RBP15.82■□□□□ 0.12
LDLR-204ENST00000545707 HTRA2O43464 458 aaPredicted RBP15.82■□□□□ 0.12
LDLR-204ENST00000545707 CDK14O94921 469 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 HMBSP08397 361 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 RENBPP51606 427 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 TIAL1Q01085 375 aaKnown RBP eCLIP15.82■□□□□ 0.12
LDLR-204ENST00000545707 PRKCQQ04759 706 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 SEMA3AQ14563 771 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 OR4D1Q15615 310 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 GNASQ5JWF2 1037 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 SAMD4BQ5PRF9 694 aaKnown RBP15.82■□□□□ 0.12
LDLR-204ENST00000545707 KRT80Q6KB66 452 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 SLC22A9Q8IVM8 553 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 DDIASQ8IXT1 998 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 SP110Q9HB58 689 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 OLAHQ9NV23 265 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 CNOT11Q9UKZ1 510 aaKnown RBP15.82■□□□□ 0.12
LDLR-204ENST00000545707 PADI3Q9ULW8 664 aa15.82■□□□□ 0.12
LDLR-204ENST00000545707 LDB2O43679 373 aa15.81■□□□□ 0.12
LDLR-204ENST00000545707 GNAO1P09471 354 aa15.81■□□□□ 0.12
LDLR-204ENST00000545707 LINC00032P0C843 101 aa15.81■□□□□ 0.12
LDLR-204ENST00000545707 CAPN3P20807 821 aa15.81■□□□□ 0.12
LDLR-204ENST00000545707 APLP1P51693 650 aa15.81■□□□□ 0.12
LDLR-204ENST00000545707 STX1BP61266 288 aa15.81■□□□□ 0.12
LDLR-204ENST00000545707 TSPY1Q01534 308 aa15.81■□□□□ 0.12
LDLR-204ENST00000545707 TRAP1Q12931 704 aaKnown RBP15.81■□□□□ 0.12
LDLR-204ENST00000545707 SLC14A2Q15849 920 aa15.81■□□□□ 0.12
LDLR-204ENST00000545707 MAP7D1Q3KQU3 841 aa15.81■□□□□ 0.12
LDLR-204ENST00000545707 USP41Q3LFD5 358 aa15.81■□□□□ 0.12
LDLR-204ENST00000545707 PABPC1LQ4VXU2 614 aaKnown RBP15.81■□□□□ 0.12
LDLR-204ENST00000545707 C8orf82Q6P1X6 216 aaPredicted RBP15.81■□□□□ 0.12
LDLR-204ENST00000545707 CARM1Q86X55 608 aa15.81■□□□□ 0.12
LDLR-204ENST00000545707 OR13C4Q8NGS5 318 aa15.81■□□□□ 0.12
LDLR-204ENST00000545707 TRPC4APQ8TEL6 797 aa15.81■□□□□ 0.12
LDLR-204ENST00000545707 DUS2Q9NX74 493 aaKnown RBP15.81■□□□□ 0.12
LDLR-204ENST00000545707 ARHGAP10A1A4S6 786 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 H3BMM5 538 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 CD1DP15813 335 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 CDH2P19022 906 aaPredicted RBP15.8■□□□□ 0.12
LDLR-204ENST00000545707 GRK4P32298 578 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 NDST2P52849 883 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 USP46P62068 366 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 HERVK_113P63132 956 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 TXNL4AP83876 142 aaKnown RBP15.8■□□□□ 0.12
LDLR-204ENST00000545707 PLOD1Q02809 727 aaPredicted RBP15.8■□□□□ 0.12
LDLR-204ENST00000545707 GALNT3Q14435 633 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 MIB1Q86YT6 1006 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 IGSF8Q969P0 613 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 PBXIP1Q96AQ6 731 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 OSBPL11Q9BXB4 747 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 ERVK-6Q9BXR3 956 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 MRPL40Q9NQ50 206 aaKnown RBP15.8■□□□□ 0.12
LDLR-204ENST00000545707 ATXN10Q9UBB4 475 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 ACTL7AQ9Y615 435 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 MROH6A6NGR9 719 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 SLC7A4O43246 635 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 B4GALT3O60512 393 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 WISP3O95389 354 aaPredicted RBP15.8■□□□□ 0.12
LDLR-204ENST00000545707 GOT2P00505 430 aaKnown RBP15.8■□□□□ 0.12
LDLR-204ENST00000545707 CYP11A1P05108 521 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 CES1P23141 567 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 EFEMP1Q12805 493 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 MS4A13Q5J8X5 152 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 FAM45BPQ6NSW5 357 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 CLYBLQ8N0X4 340 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 SCML4Q8N228 414 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 FAM47BQ8NA70 645 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 FAM45AQ8TCE6 357 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 DDI1Q8WTU0 396 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms