RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 TYRO3Q06418 890 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 SLC10A7Q0GE19 358 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 CLN3Q13286 438 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 DPYSQ14117 519 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 RFTN1Q14699 578 aaPredicted RBP8.49□□□□□ -1.05
USP28-215ENST00000545608 ASIC2Q16515 512 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 CCDC183Q5T5S1 534 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 PPP1R2P3Q6NXS1 205 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 DPPA4Q7L190 304 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 VASH1Q7L8A9 365 aaPredicted RBP8.49□□□□□ -1.05
USP28-215ENST00000545608 TAF8Q7Z7C8 310 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 CLEC14AQ86T13 490 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 FBXO39Q8N4B4 442 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 ARL14Q8N4G2 192 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 Q8N9G6 341 aaPredicted RBP8.49□□□□□ -1.05
USP28-215ENST00000545608 FAM46DQ8NEK8 389 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 OR56A4Q8NGH8 313 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 ATL2Q8NHH9 583 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 CCL4L1Q8NHW4 92 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 FNIP1Q8TF40 1166 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 SNRNP27Q8WVK2 155 aaKnown RBP8.49□□□□□ -1.05
USP28-215ENST00000545608 TTC9Q92623 222 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 LIN37Q96GY3 246 aaPredicted RBP8.49□□□□□ -1.05
USP28-215ENST00000545608 GBP4Q96PP9 640 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 PSKH2Q96QS6 385 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 GFM1Q96RP9 751 aaKnown RBP8.49□□□□□ -1.05
USP28-215ENST00000545608 EIF3CQ99613 913 aaKnown RBP8.49□□□□□ -1.05
USP28-215ENST00000545608 FOXP3Q9BZS1 431 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 SEMA4CQ9C0C4 833 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 TMEM168Q9H0V1 697 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 LRRN3Q9H3W5 708 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 EPB41L5Q9HCM4 733 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 ETNK2Q9NVF9 386 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 AIPL1Q9NZN9 384 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 B4GALT6Q9UBX8 382 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 ATXN7L1Q9ULK2 861 aaPredicted RBP8.49□□□□□ -1.05
USP28-215ENST00000545608 MAP4K5Q9Y4K4 846 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 PCDHGC4Q9Y5F7 938 aa8.49□□□□□ -1.05
USP28-215ENST00000545608 D6RAR5 112 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 K7ENP7 123 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 AGRPO00253 132 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 CACNB4O00305 520 aaPredicted RBP8.48□□□□□ -1.05
USP28-215ENST00000545608 TNFRSF10CO14798 259 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 PLD2O14939 933 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 EFSO43281 561 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 PRMT3O60678 531 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 PEX11BO96011 259 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 FUCA1P04066 466 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 ITGA2BP08514 1039 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 HOXC4P09017 264 aaPredicted RBP8.48□□□□□ -1.05
USP28-215ENST00000545608 ELFN1P0C7U0 828 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 HGFP14210 728 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 PLA2G2AP14555 144 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 TCF4P15884 667 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 CR2P20023 1033 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 SLC5A2P31639 672 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 UGT1A5P35504 534 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 PRKCIP41743 596 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 INHBCP55103 352 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 AP1S1P61966 158 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 POLR2LP62875 67 aaKnown RBP8.48□□□□□ -1.05
USP28-215ENST00000545608 LY6DQ14210 128 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 LBRQ14739 615 aaKnown RBP8.48□□□□□ -1.05
USP28-215ENST00000545608 ACOX1Q15067 660 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 PTPRRQ15256 657 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 ZSCAN23Q3MJ62 389 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 ANO6Q4KMQ2 910 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 KIAA1614Q5VZ46 1190 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 PNCKQ6P2M8 343 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 INO80CQ6PI98 192 aaPredicted RBP8.48□□□□□ -1.05
USP28-215ENST00000545608 RAB11FIP2Q7L804 512 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 ZNF605Q86T29 641 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 CCNJLQ8IV13 435 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 PSTKQ8IV42 348 aaKnown RBP8.48□□□□□ -1.05
USP28-215ENST00000545608 CBARPQ8N350 705 aaPredicted RBP8.48□□□□□ -1.05
USP28-215ENST00000545608 PGBD5Q8N414 524 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 LZTR1Q8N653 840 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 PAF1Q8N7H5 531 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 OR6C4Q8NGE1 309 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 ZNF653Q96CK0 615 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 WBP1Q96G27 269 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 COQ10AQ96MF6 247 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 NAP1L5Q96NT1 182 aaPredicted RBP8.48□□□□□ -1.05
USP28-215ENST00000545608 CYP4F12Q9HCS2 524 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 TMEM63CQ9P1W3 806 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 MYO1AQ9UBC5 1043 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 SEPT3Q9UH03 358 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 MOSPD1Q9UJG1 213 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 RNF215Q9Y6U7 377 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 NBEAQ8NFP9 2946 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 KIF26BQ2KJY2 2108 aa8.48□□□□□ -1.05
USP28-215ENST00000545608 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.47□□□□□ -1.05
USP28-215ENST00000545608 SOWAHDA6NJG2 315 aa8.47□□□□□ -1.05
USP28-215ENST00000545608 B4DGG1 531 aa8.47□□□□□ -1.05
USP28-215ENST00000545608 RNF223E7ERA6 249 aa8.47□□□□□ -1.05
USP28-215ENST00000545608 H3BRJ5 948 aa8.47□□□□□ -1.05
USP28-215ENST00000545608 TMX2-CTNND1H3BSU7 103 aa8.47□□□□□ -1.05
USP28-215ENST00000545608 HTRA2O43464 458 aaPredicted RBP8.47□□□□□ -1.05
USP28-215ENST00000545608 B4GAT1O43505 415 aa8.47□□□□□ -1.05
USP28-215ENST00000545608 MAFKO60675 156 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms