RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 COQ10AQ96MF6 247 aa14.74□□□□□ -0.05
RTN3-214ENST00000545432 NAA15Q9BXJ9 866 aaKnown RBP14.74□□□□□ -0.05
RTN3-214ENST00000545432 FRMD8Q9BZ67 464 aaPredicted RBP14.74□□□□□ -0.05
RTN3-214ENST00000545432 TRIT1Q9H3H1 467 aaKnown RBP14.74□□□□□ -0.05
RTN3-214ENST00000545432 WDR26Q9H7D7 661 aa14.74□□□□□ -0.05
RTN3-214ENST00000545432 GPN2Q9H9Y4 310 aaPredicted RBP14.74□□□□□ -0.05
RTN3-214ENST00000545432 KCNMB2Q9Y691 235 aa14.74□□□□□ -0.05
RTN3-214ENST00000545432 ITPR2Q14571 2701 aa14.73□□□□□ -0.05
RTN3-214ENST00000545432 ENO4A6NNW6 628 aa14.73□□□□□ -0.05
RTN3-214ENST00000545432 DLGAP3O95886 979 aa14.73□□□□□ -0.05
RTN3-214ENST00000545432 CYP1A1P04798 512 aaPredicted RBP14.73□□□□□ -0.05
RTN3-214ENST00000545432 PRKCGP05129 697 aa14.73□□□□□ -0.05
RTN3-214ENST00000545432 MMP8P22894 467 aa14.73□□□□□ -0.05
RTN3-214ENST00000545432 FASLGP48023 281 aa14.73□□□□□ -0.05
RTN3-214ENST00000545432 ILF3Q12906 894 aaKnown RBP eCLIP14.73□□□□□ -0.05
RTN3-214ENST00000545432 PEX6Q13608 980 aa14.73□□□□□ -0.05
RTN3-214ENST00000545432 MAP7Q14244 749 aa14.73□□□□□ -0.05
RTN3-214ENST00000545432 NKAIN2Q5VXU1 208 aa14.73□□□□□ -0.05
RTN3-214ENST00000545432 ANKS6Q68DC2 871 aa14.73□□□□□ -0.05
RTN3-214ENST00000545432 HIST2H2BCQ6DN03 193 aa14.73□□□□□ -0.05
RTN3-214ENST00000545432 CCDC185Q8N715 623 aa14.73□□□□□ -0.05
RTN3-214ENST00000545432 PATE1Q8WXA2 126 aa14.73□□□□□ -0.05
RTN3-214ENST00000545432 EXOC2Q96KP1 924 aa14.73□□□□□ -0.05
RTN3-214ENST00000545432 LRRC19Q9H756 370 aa14.73□□□□□ -0.05
RTN3-214ENST00000545432 METTL5Q9NRN9 209 aaKnown RBP14.73□□□□□ -0.05
RTN3-214ENST00000545432 KCTD5Q9NXV2 234 aa14.73□□□□□ -0.05
RTN3-214ENST00000545432 TMEM9Q9P0T7 183 aa14.73□□□□□ -0.05
RTN3-214ENST00000545432 RWDD2AQ9UIY3 292 aa14.73□□□□□ -0.05
RTN3-214ENST00000545432 SLC17A4Q9Y2C5 497 aa14.73□□□□□ -0.05
RTN3-214ENST00000545432 TEP1Q99973 2627 aaKnown RBP14.72□□□□□ -0.05
RTN3-214ENST00000545432 EFCAB7A8K855 629 aa14.72□□□□□ -0.05
RTN3-214ENST00000545432 PRAMEF11O60813 436 aa14.72□□□□□ -0.05
RTN3-214ENST00000545432 RECKO95980 971 aa14.72□□□□□ -0.05
RTN3-214ENST00000545432 AK4P27144 223 aaPredicted RBP14.72□□□□□ -0.05
RTN3-214ENST00000545432 EPHB2P29323 1055 aa14.72□□□□□ -0.05
RTN3-214ENST00000545432 SDC4P31431 198 aa14.72□□□□□ -0.05
RTN3-214ENST00000545432 RGRP47804 291 aa14.72□□□□□ -0.05
RTN3-214ENST00000545432 GSCP56915 257 aaPredicted RBP14.72□□□□□ -0.05
RTN3-214ENST00000545432 CTBSQ01459 385 aa14.72□□□□□ -0.05
RTN3-214ENST00000545432 NSUN2Q08J23 767 aaKnown RBP eCLIP14.72□□□□□ -0.05
RTN3-214ENST00000545432 CAPRIN2Q6IMN6 1127 aaKnown RBP14.72□□□□□ -0.05
RTN3-214ENST00000545432 SRLQ86TD4 932 aa14.72□□□□□ -0.05
RTN3-214ENST00000545432 NOP9Q86U38 636 aaKnown RBP14.72□□□□□ -0.05
RTN3-214ENST00000545432 GALNT11Q8NCW6 608 aa14.72□□□□□ -0.05
RTN3-214ENST00000545432 MSANTD4Q8NCY6 345 aa14.72□□□□□ -0.05
RTN3-214ENST00000545432 GPT2Q8TD30 523 aa14.72□□□□□ -0.05
RTN3-214ENST00000545432 CPA5Q8WXQ8 436 aa14.72□□□□□ -0.05
RTN3-214ENST00000545432 KIAA1143Q96AT1 154 aaPredicted RBP14.72□□□□□ -0.05
RTN3-214ENST00000545432 NSMCE3Q96MG7 304 aa14.72□□□□□ -0.05
RTN3-214ENST00000545432 NCAPGQ9BPX3 1015 aa14.72□□□□□ -0.05
RTN3-214ENST00000545432 PDCL3Q9H2J4 239 aa14.72□□□□□ -0.05
RTN3-214ENST00000545432 CARS2Q9HA77 564 aaKnown RBP14.72□□□□□ -0.05
RTN3-214ENST00000545432 UBA2Q9UBT2 640 aaPredicted RBP14.72□□□□□ -0.05
RTN3-214ENST00000545432 DACH1Q9UI36 760 aa14.72□□□□□ -0.05
RTN3-214ENST00000545432 TP53TG5Q9Y2B4 290 aa14.72□□□□□ -0.05
RTN3-214ENST00000545432 KCTD3Q9Y597 815 aa14.72□□□□□ -0.05
RTN3-214ENST00000545432 CACNA1DQ01668 2161 aa14.71□□□□□ -0.05
RTN3-214ENST00000545432 GOLGA6L4A6NEF3 574 aa14.71□□□□□ -0.05
RTN3-214ENST00000545432 K7EM74 188 aa14.71□□□□□ -0.05
RTN3-214ENST00000545432 IVLP07476 585 aa14.71□□□□□ -0.05
RTN3-214ENST00000545432 ELFN1P0C7U0 828 aa14.71□□□□□ -0.05
RTN3-214ENST00000545432 PRKAR1AP10644 381 aa14.71□□□□□ -0.05
RTN3-214ENST00000545432 PRKCSHP14314 528 aaPredicted RBP14.71□□□□□ -0.05
RTN3-214ENST00000545432 SERPINA4P29622 427 aa14.71□□□□□ -0.05
RTN3-214ENST00000545432 POLR2LP62875 67 aaKnown RBP14.71□□□□□ -0.05
RTN3-214ENST00000545432 SEPT6Q14141 434 aa14.71□□□□□ -0.05
RTN3-214ENST00000545432 DEFB109BQ30KR1 87 aa14.71□□□□□ -0.05
RTN3-214ENST00000545432 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.71□□□□□ -0.05
RTN3-214ENST00000545432 WDR74Q6RFH5 385 aaPredicted RBP14.71□□□□□ -0.05
RTN3-214ENST00000545432 CEACAM20Q6UY09 585 aa14.71□□□□□ -0.05
RTN3-214ENST00000545432 SLFN11Q7Z7L1 901 aa14.71□□□□□ -0.05
RTN3-214ENST00000545432 PYROXD2Q8N2H3 581 aa14.71□□□□□ -0.05
RTN3-214ENST00000545432 JOSD2Q8TAC2 188 aa14.71□□□□□ -0.05
RTN3-214ENST00000545432 EPS8L1Q8TE68 723 aa14.71□□□□□ -0.05
RTN3-214ENST00000545432 PTCD2Q8WV60 388 aaKnown RBP14.71□□□□□ -0.05
RTN3-214ENST00000545432 STARD8Q92502 1023 aa14.71□□□□□ -0.05
RTN3-214ENST00000545432 ATP13A3Q9H7F0 1226 aa14.71□□□□□ -0.05
RTN3-214ENST00000545432 PHPT1Q9NRX4 125 aaPredicted RBP14.71□□□□□ -0.05
RTN3-214ENST00000545432 UTP20O75691 2785 aaKnown RBP14.7□□□□□ -0.06
RTN3-214ENST00000545432 J3KR12 359 aa14.7□□□□□ -0.06
RTN3-214ENST00000545432 MMEP08473 750 aa14.7□□□□□ -0.06
RTN3-214ENST00000545432 KRT7P08729 469 aa14.7□□□□□ -0.06
RTN3-214ENST00000545432 TCN2P20062 427 aa14.7□□□□□ -0.06
RTN3-214ENST00000545432 MPSTP25325 297 aa14.7□□□□□ -0.06
RTN3-214ENST00000545432 ADCY8P40145 1251 aa14.7□□□□□ -0.06
RTN3-214ENST00000545432 STAT5AP42229 794 aa14.7□□□□□ -0.06
RTN3-214ENST00000545432 NDST2P52849 883 aa14.7□□□□□ -0.06
RTN3-214ENST00000545432 MLLT10P55197 1068 aa14.7□□□□□ -0.06
RTN3-214ENST00000545432 PTP4A2Q12974 167 aa14.7□□□□□ -0.06
RTN3-214ENST00000545432 CDO1Q16878 200 aa14.7□□□□□ -0.06
RTN3-214ENST00000545432 NAA35Q5VZE5 725 aa14.7□□□□□ -0.06
RTN3-214ENST00000545432 ZNF677Q86XU0 584 aa14.7□□□□□ -0.06
RTN3-214ENST00000545432 UNC5BQ8IZJ1 945 aa14.7□□□□□ -0.06
RTN3-214ENST00000545432 TSEN2Q8NCE0 465 aaKnown RBP14.7□□□□□ -0.06
RTN3-214ENST00000545432 FAM172AQ8WUF8 416 aa14.7□□□□□ -0.06
RTN3-214ENST00000545432 PRDM8Q9NQV8 689 aa14.7□□□□□ -0.06
RTN3-214ENST00000545432 CUEDC1Q9NWM3 386 aaPredicted RBP14.7□□□□□ -0.06
RTN3-214ENST00000545432 KCNK4Q9NYG8 393 aa14.7□□□□□ -0.06
RTN3-214ENST00000545432 SUFUQ9UMX1 484 aa14.7□□□□□ -0.06
RTN3-214ENST00000545432 ANKRD36A6QL64 1941 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms