RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, human

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-222	ENST00000545308	HIST2H2BC	Q6DN03	193 aa		4.24	□□□□□ -1.73
SNHG1-222	ENST00000545308	HIST2H2BD	Q6DRA6	164 aa		4.24	□□□□□ -1.73
SNHG1-222	ENST00000545308	LRRC8E	Q6NSJ5	796 aa		4.24	□□□□□ -1.73
SNHG1-222	ENST00000545308	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.24	□□□□□ -1.73
SNHG1-222	ENST00000545308	BHLHA9	Q7RTU4	235 aa		4.24	□□□□□ -1.73
SNHG1-222	ENST00000545308	CCDC25	Q86WR0	208 aa		4.24	□□□□□ -1.73
SNHG1-222	ENST00000545308	VSIG1	Q86XK7	387 aa		4.24	□□□□□ -1.73
SNHG1-222	ENST00000545308	TICAM1	Q8IUC6	712 aa		4.24	□□□□□ -1.73
SNHG1-222	ENST00000545308	GPATCH11	Q8N954	259 aa		4.24	□□□□□ -1.73
SNHG1-222	ENST00000545308	ZNF398	Q8TD17	642 aa		4.24	□□□□□ -1.73
SNHG1-222	ENST00000545308	BBS4	Q96RK4	519 aa		4.24	□□□□□ -1.73
SNHG1-222	ENST00000545308	KLHL4	Q9C0H6	718 aa		4.24	□□□□□ -1.73
SNHG1-222	ENST00000545308	WSB2	Q9NYS7	404 aa	Predicted RBP	4.24	□□□□□ -1.73
SNHG1-222	ENST00000545308	C5AR2	Q9P296	337 aa		4.24	□□□□□ -1.73
SNHG1-222	ENST00000545308	PADI1	Q9ULC6	663 aa		4.24	□□□□□ -1.73
SNHG1-222	ENST00000545308	PTRH2	Q9Y3E5	179 aa	Known RBP	4.24	□□□□□ -1.73
SNHG1-222	ENST00000545308	SLIT2	O94813	1529 aa		4.24	□□□□□ -1.73
SNHG1-222	ENST00000545308	RPGRIP1L	Q68CZ1	1315 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	KIF1B	O60333	1816 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	HFM1	A2PYH4	1435 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	DISP2	A7MBM2	1401 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	FAM237A	A0A1B0GTK4	181 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	DNAJC9-AS1	A6NH13	148 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	DDTL	A6NHG4	134 aa	Predicted RBP	4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	UBE2Q2L	H0YL09	131 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	SMIM22	K7EJ46	135 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	EBAG9	O00559	213 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	TBX10	O75333	385 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	PROP1	O75360	226 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	NKX2-2	O95096	273 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	CSPG5	O95196	566 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	CHRM5	P08912	532 aa	Predicted RBP	4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	IRF1	P10914	325 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	CYP2A6	P11509	494 aa	Predicted RBP	4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	KRT10	P13645	584 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	IL7R	P16871	459 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	PTPN2	P17706	415 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	HMGB2	P26583	209 aa	Known RBP	4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	TACR3	P29371	465 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	CENPA	P49450	140 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	AIMP1	Q12904	312 aa	Known RBP	4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	TNFAIP1	Q13829	316 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	C1orf141	Q5JVX7	400 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	CPLX2	Q6PUV4	134 aa	Known RBP	4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	CFAP77	Q6ZQR2	320 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	FAM47E	Q6ZV65	393 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	GRASP	Q7Z6J2	395 aa	Predicted RBP	4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	AMIGO2	Q86SJ2	522 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	ADGRA1	Q86SQ6	560 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	NOXA1	Q86UR1	476 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	KBTBD6	Q86V97	674 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	RASSF8	Q8NHQ8	419 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	PRPF31	Q8WWY3	499 aa	Known RBP	4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	KAT2B	Q92831	832 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	ATOH1	Q92858	354 aa	Predicted RBP	4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	SAT2	Q96F10	170 aa	Predicted RBP	4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	ELMOD3	Q96FG2	381 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	GCNA	Q96QF7	691 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	OR2A14	Q96R47	310 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	TIMP4	Q99727	224 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	APOL6	Q9BWW8	343 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	TEX12	Q9BXU0	123 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	ACTR5	Q9H9F9	607 aa	Predicted RBP	4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	MOV10	Q9HCE1	1003 aa	Known RBP	4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	CPNE5	Q9HCH3	593 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	WDR6	Q9NNW5	1121 aa	Known RBP	4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	DECR2	Q9NUI1	292 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	GIMAP4	Q9NUV9	329 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	SETD4	Q9NVD3	440 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	PLEKHB1	Q9UF11	243 aa	Predicted RBP	4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	SLC8A2	Q9UPR5	921 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	LSM4	Q9Y4Z0	139 aa	Known RBP	4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	ARHGEF10	O15013	1369 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	GLI3	P10071	1580 aa		4.23	□□□□□ -1.73
SNHG1-222	ENST00000545308	PTPRU	Q92729	1446 aa		4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	IQGAP3	Q86VI3	1631 aa		4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	XRN1	Q8IZH2	1706 aa	Known RBP	4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	TRBV5-7	A0A0A0MS05	114 aa		4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308		A0A0U1RQG5	324 aa	Predicted RBP	4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	GLOD5	A6NK44	160 aa		4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	HSPB2	A8KAH6	182 aa		4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	KLRF2	D3W0D1	207 aa		4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	SCAMP1	O15126	338 aa		4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	ADAMDEC1	O15204	470 aa		4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	INPPL1	O15357	1258 aa		4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	PAPSS1	O43252	624 aa	Predicted RBP	4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	MT-CYB	P00156	380 aa	Predicted RBP	4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	HOXB5	P09067	269 aa		4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	CTPS1	P17812	591 aa		4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	WT1	P19544	449 aa	Predicted RBP	4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	SAT1	P21673	171 aa		4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	TBXAS1	P24557	533 aa	Predicted RBP	4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	YWHAQ	P27348	245 aa		4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	CXCR3	P49682	368 aa		4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	CAMP	P49913	170 aa		4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	CLCN3	P51790	818 aa		4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	GALC	P54803	685 aa		4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	MFAP4	P55083	255 aa		4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	RRP1	P56182	461 aa	Known RBP	4.22	□□□□□ -1.73
SNHG1-222	ENST00000545308	PRPF4B	Q13523	1007 aa	Known RBP	4.22	□□□□□ -1.73

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