RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 PPP2R5EQ16537 467 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 PRRT3Q5FWE3 981 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 MFSD7Q6UXD7 560 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 NLRP8Q86W28 1048 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 LMX1AQ8TE12 382 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 PIH1D2Q8WWB5 315 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 P3H4Q92791 437 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 RNF25Q96BH1 459 aaPredicted RBP11.83□□□□□ -0.52
HDAC4-216ENST00000544989 SRPK1Q96SB4 655 aaKnown RBP11.83□□□□□ -0.52
HDAC4-216ENST00000544989 VAT1Q99536 393 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 LGMNQ99538 433 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 TDRD1Q9BXT4 1180 aaKnown RBP11.83□□□□□ -0.52
HDAC4-216ENST00000544989 PHPT1Q9NRX4 125 aaPredicted RBP11.83□□□□□ -0.52
HDAC4-216ENST00000544989 UCKL1Q9NWZ5 548 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 DOLKQ9UPQ8 538 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 EFR3BQ9Y2G0 817 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 DGKBQ9Y6T7 804 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 ANKRD36A6QL64 1941 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 GOLGA4Q13439 2230 aaKnown RBP11.83□□□□□ -0.52
HDAC4-216ENST00000544989 A0A0J9YYE9 177 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 TTC24A2A3L6 582 aaPredicted RBP11.82□□□□□ -0.52
HDAC4-216ENST00000544989 CCDC66A2RUB6 948 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 HACD1B0YJ81 288 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 PJA2O43164 708 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 CST8O60676 142 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 MAP3K6O95382 1288 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 TOP3BO95985 862 aaKnown RBP11.82□□□□□ -0.52
HDAC4-216ENST00000544989 TNFP01375 233 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 TRBC1P01850 177 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 PRKCGP05129 697 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 HLA-DQB2P05538 268 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 SPINK2P20155 84 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 TNNT3P45378 269 aaPredicted RBP11.82□□□□□ -0.52
HDAC4-216ENST00000544989 GSDMDP57764 484 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 SRP54P61011 504 aaKnown RBP11.82□□□□□ -0.52
HDAC4-216ENST00000544989 DSC2Q02487 901 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 DPTQ07507 201 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 DNAJC3Q13217 504 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 PEX6Q13608 980 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 CCDC157Q569K6 752 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 ZNF542PQ5EBM4 170 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 PNCKQ6P2M8 343 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 ENPP7Q6UWV6 458 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 SPOCD1Q6ZMY3 1216 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 ZNF765Q7L2R6 523 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 KIAA1328Q86T90 577 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 NT5DC3Q86UY8 548 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 GKN2Q86XP6 184 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 CCDC50Q8IVM0 306 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 NRSN1Q8IZ57 195 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 SYCE1Q8N0S2 351 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 CBARPQ8N350 705 aaPredicted RBP11.82□□□□□ -0.52
HDAC4-216ENST00000544989 OR56A4Q8NGH8 313 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 ARRDC2Q8TBH0 407 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 KIAA1524Q8TCG1 905 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 TFB1MQ8WVM0 346 aaKnown RBP11.82□□□□□ -0.52
HDAC4-216ENST00000544989 NAT6Q93015 286 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 DTD2Q96FN9 168 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 LYSMD1Q96S90 227 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 SLC25A51Q9H1U9 297 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 PCDH9Q9HC56 1237 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 OR1A2Q9Y585 309 aa11.82□□□□□ -0.52
HDAC4-216ENST00000544989 KALRNO60229 2985 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 hCG_1818297A0A087WSY0 165 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 RGSL1A5PLK6 1076 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 CAPN8A6NHC0 703 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 NPIPB15A6NHN6 443 aaPredicted RBP11.81□□□□□ -0.52
HDAC4-216ENST00000544989 KCNK1O00180 336 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 MYCLP1P12525 358 aaPredicted RBP11.81□□□□□ -0.52
HDAC4-216ENST00000544989 JUPP14923 745 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 CTNNA1P35221 906 aaKnown RBP11.81□□□□□ -0.52
HDAC4-216ENST00000544989 CD86P42081 329 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 DYNLT1P63172 113 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 KIF5AQ12840 1032 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 NR0B2Q15466 257 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 TEX44Q53QW1 395 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 TPRG1LQ5T0D9 272 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 C6orf132Q5T0Z8 1188 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 CCDC70Q6NSX1 233 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 DHRS13Q6UX07 377 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 HID1Q8IV36 788 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 PDCD7Q8N8D1 485 aaKnown RBP11.81□□□□□ -0.52
HDAC4-216ENST00000544989 OR6C4Q8NGE1 309 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 WDR48Q8TAF3 677 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 CCHCR1Q8TD31 782 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 APOLD1Q96LR9 279 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 NSMCE3Q96MG7 304 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 LRRC61Q9BV99 259 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 BOCQ9BWV1 1114 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 CDH19Q9H159 772 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 RAD18Q9NS91 495 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 SEPT10Q9P0V9 454 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 KLF15Q9UIH9 416 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 HYOU1Q9Y4L1 999 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 PCDHA3Q9Y5H8 950 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 CELSR3Q9NYQ7 3312 aa11.81□□□□□ -0.52
HDAC4-216ENST00000544989 TDRD6O60522 2096 aaKnown RBP11.8□□□□□ -0.52
HDAC4-216ENST00000544989 A8MX80 341 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 C1QTNF9BB2RNN3 333 aa11.8□□□□□ -0.52
HDAC4-216ENST00000544989 ANKRD66B4E2M5 251 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms