RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 ZNF599Q96NL3 588 aa12.55□□□□□ -0.4
ACTN1-206ENST00000544964 QKIQ96PU8 341 aaKnown RBP eCLIP12.55□□□□□ -0.4
ACTN1-206ENST00000544964 CINPQ9BW66 212 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-206ENST00000544964 SLC17A9Q9BYT1 436 aa12.55□□□□□ -0.4
ACTN1-206ENST00000544964 CEP41Q9BYV8 373 aa12.55□□□□□ -0.4
ACTN1-206ENST00000544964 PRORYQ9H606 182 aa12.55□□□□□ -0.4
ACTN1-206ENST00000544964 NLGN3Q9NZ94 848 aa12.55□□□□□ -0.4
ACTN1-206ENST00000544964 KLF15Q9UIH9 416 aa12.55□□□□□ -0.4
ACTN1-206ENST00000544964 COL6A6A6NMZ7 2263 aa12.55□□□□□ -0.4
ACTN1-206ENST00000544964 AHCTF1Q8WYP5 2266 aa12.55□□□□□ -0.4
ACTN1-206ENST00000544964 TTC24A2A3L6 582 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-206ENST00000544964 K7ESM1 405 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 SCAMP1O15126 338 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 MUSKO15146 869 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 LZTS3O60299 673 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-206ENST00000544964 PAK4O96013 591 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-206ENST00000544964 MT-CO3P00414 261 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 JCHAINP01591 159 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 RBP3P10745 1247 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 CCNB1P14635 433 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 TCP1P17987 556 aaKnown RBP12.54□□□□□ -0.4
ACTN1-206ENST00000544964 RBL1P28749 1068 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 MMP13P45452 471 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 RGRP47804 291 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 MAXP61244 160 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 ZBTB17Q13105 803 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 XRCC4Q13426 336 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 SNX1Q13596 522 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 ZNF235Q14590 738 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 RFTN1Q14699 578 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-206ENST00000544964 TBC1D25Q3MII6 688 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 MARC1Q5VT66 337 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 DARS2Q6PI48 645 aaKnown RBP12.54□□□□□ -0.4
ACTN1-206ENST00000544964 PARGQ86W56 976 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 PLPP6Q8IY26 295 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 PGBD5Q8N414 524 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 FAM174AQ8TBP5 190 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 MAML1Q92585 1016 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 ZNF592Q92610 1267 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 C1QTNF2Q9BXJ5 285 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 BRD8Q9H0E9 1235 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 RBM22Q9NW64 420 aaKnown RBP eCLIP12.54□□□□□ -0.41e-6■■□□□ 11.9
ACTN1-206ENST00000544964 DNAJC28Q9NX36 388 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 HECAQ9UBI9 543 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-206ENST00000544964 SEPT3Q9UH03 358 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 RAI2Q9Y5P3 530 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 HS3ST3A1Q9Y663 406 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 SAR1BQ9Y6B6 198 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 ANKRD36A6QL64 1941 aa12.54□□□□□ -0.4
ACTN1-206ENST00000544964 IGLON5A6NGN9 336 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 C16orf96A6NNT2 1141 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 HACD1B0YJ81 288 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 PGRMC1O00264 195 aaKnown RBP12.53□□□□□ -0.4
ACTN1-206ENST00000544964 KRIT1O00522 736 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 CES2O00748 559 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 INSIG1O15503 277 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 OPA1O60313 960 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 GSRP00390 522 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 CSF2P04141 144 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 HLA-DQB2P05538 268 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 GP1BAP07359 652 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 RENBPP51606 427 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 PFN3P60673 137 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 HNRNPKP61978 463 aaKnown RBP eCLIP12.53□□□□□ -0.4
ACTN1-206ENST00000544964 SNRPD1P62314 119 aaKnown RBP12.53□□□□□ -0.4
ACTN1-206ENST00000544964 IFI35P80217 286 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-206ENST00000544964 E2F1Q01094 437 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 TLE3Q04726 772 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 ITKQ08881 620 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 ZNF805Q5CZA5 627 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 DCP2Q8IU60 420 aaKnown RBP12.53□□□□□ -0.4
ACTN1-206ENST00000544964 CDKL3Q8IVW4 592 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-206ENST00000544964 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.53□□□□□ -0.4
ACTN1-206ENST00000544964 TEX26Q8N6G2 289 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 DENND6BQ8NEG7 585 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 OR2AP1Q8NGE2 309 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 SLC35B2Q8TB61 432 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 ACTRT1Q8TDG2 376 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 MAIP1Q8WWC4 291 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 HTR3CQ8WXA8 447 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 FGF11Q92914 225 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 FATE1Q969F0 183 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 GDAP1L1Q96MZ0 367 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 LENG8Q96PV6 779 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-206ENST00000544964 PSKH2Q96QS6 385 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 UBL7Q96S82 380 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-206ENST00000544964 AP1M1Q9BXS5 423 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 NT5MQ9NPB1 228 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 DNPEPQ9ULA0 475 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 PNMA8BQ9ULN7 279 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-206ENST00000544964 TTC7AQ9ULT0 858 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-206ENST00000544964 TTLL3Q9Y4R7 772 aa12.53□□□□□ -0.4
ACTN1-206ENST00000544964 ASH1LQ9NR48 2969 aaKnown RBP12.52□□□□□ -0.4
ACTN1-206ENST00000544964 A0A1W2PNU3 283 aaPredicted RBP12.52□□□□□ -0.41
ACTN1-206ENST00000544964 AREL1O15033 823 aa12.52□□□□□ -0.41
ACTN1-206ENST00000544964 KCNN4O15554 427 aa12.52□□□□□ -0.41
ACTN1-206ENST00000544964 TSPAN6O43657 245 aa12.52□□□□□ -0.41
ACTN1-206ENST00000544964 LIASO43766 372 aa12.52□□□□□ -0.41
ACTN1-206ENST00000544964 C1QL1O75973 258 aa12.52□□□□□ -0.41
ACTN1-206ENST00000544964 IGSF6O95976 241 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms