RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 KLHL29Q96CT2 875 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 MFSD3Q96ES6 412 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 MCMBPQ9BTE3 642 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 TRIM55Q9BYV6 548 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 CPEB1Q9BZB8 566 aaKnown RBP7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 CIPCQ9C0C6 399 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 SCUBE2Q9NQ36 999 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 SAR1AQ9NR31 198 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 SLC2A4RGQ9NR83 387 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 CHRAC1Q9NRG0 131 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 HEBP1Q9NRV9 189 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 SLC17A6Q9P2U8 582 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 SLC2A6Q9UGQ3 507 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 SOX13Q9UN79 622 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 RPL26L1Q9UNX3 145 aaKnown RBP7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 MTO1Q9Y2Z2 717 aaKnown RBP7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 TCAF1Q9Y4C2 921 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 KCTD3Q9Y597 815 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 TTC28Q96AY4 2481 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 ATG2BQ96BY7 2078 aa7.02□□□□□ -1.28
HMGCS2-204ENST00000544913 FAM237BA0A1B0GVD1 139 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 FAM159BA6NKW6 160 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 COPEO14579 308 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 BIRC5O15392 142 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 SOCS5O75159 536 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 UBOX5O94941 541 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 UNC5CO95185 931 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 FGF1P05230 155 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 PIRTP0C851 137 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 C7P10643 843 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 HLA-EP13747 358 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 HNRNPLP14866 589 aaKnown RBP eCLIP7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 PGAM1P18669 254 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 HLA-DPA1P20036 260 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 NMBRP28336 390 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 NPY2RP49146 381 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 ARSDP51689 593 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 MNAT1P51948 309 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 NEK3P51956 506 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 ZNF140P52738 457 aaPredicted RBP7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 PPARDQ03181 441 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 ACVR1Q04771 509 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 POU6F1Q14863 301 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 HNRNPA1L2Q32P51 320 aaKnown RBP7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 ANKRD20A4Q4UJ75 823 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 TMEM196Q5HYL7 178 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 FBXW10Q5XX13 1052 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 SH2D5Q6ZV89 423 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 LINC00523Q86TU6 105 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 CTAGE3PQ8IX95 158 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 BBS5Q8N3I7 341 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 SLC25A41Q8N5S1 370 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 GPATCH11Q8N954 259 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 MDGA1Q8NFP4 955 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 MAFAQ8NHW3 353 aaPredicted RBP7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 DNASE1L2Q92874 299 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 CFAP36Q96G28 342 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 TMEM237Q96Q45 408 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 MCCC1Q96RQ3 725 aaPredicted RBP7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 RANBP9Q96S59 729 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 FAM129BQ96TA1 746 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 SIKE1Q9BRV8 207 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 FSD1LQ9BXM9 530 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 IL22Q9GZX6 179 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 MLXIPLQ9NP71 852 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 ARHGEF3Q9NR81 526 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 IL1RAPL1Q9NZN1 696 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 GGT7Q9UJ14 662 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 SLC25A13Q9UJS0 675 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 PPIL1Q9Y3C6 166 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 PIAS3Q9Y6X2 628 aa7.02□□□□□ -1.29
HMGCS2-204ENST00000544913 HMX2A2RU54 273 aa7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 C19orf67A6NJJ6 358 aa7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 GAPDHSO14556 408 aaPredicted RBP7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 UGT1A9O60656 530 aa7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 ADAM23O75077 832 aa7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 IGSF6O95976 241 aa7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 EGFP01133 1207 aa7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 F7P08709 466 aaPredicted RBP7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 NEFHP12036 1026 aa7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 NQO1P15559 274 aaKnown RBP7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 LHCGRP22888 699 aa7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 CRHR1P34998 444 aa7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 CCNFP41002 786 aa7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 ETV4P43268 484 aa7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 PTPRCAPQ14761 206 aa7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 ZKSCAN8Q15776 578 aaPredicted RBP7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 INSCQ1MX18 579 aa7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 ICE2Q659A1 982 aa7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 ESRP1Q6NXG1 681 aaKnown RBP7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 PKN3Q6P5Z2 889 aa7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 KYAT3Q6YP21 454 aaKnown RBP7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 FITM2Q8N6M3 262 aa7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 PPM1NQ8N819 430 aa7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 LPCAT1Q8NF37 534 aa7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 CFAP61Q8NHU2 1237 aa7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 TUBGCP5Q96RT8 1024 aa7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 P2RY13Q9BPV8 354 aa7.01□□□□□ -1.29
HMGCS2-204ENST00000544913 TSSK1BQ9BXA7 367 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms