RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 UGT1A5P35504 534 aa16.27■□□□□ 0.2
DDX55-212ENST00000544738 ADKP55263 362 aaKnown RBP16.27■□□□□ 0.2
DDX55-212ENST00000544738 ZNF235Q14590 738 aa16.27■□□□□ 0.2
DDX55-212ENST00000544738 INPP5AQ14642 412 aa16.27■□□□□ 0.2
DDX55-212ENST00000544738 CLCA4Q14CN2 919 aa16.27■□□□□ 0.2
DDX55-212ENST00000544738 ELOCQ15369 112 aa16.27■□□□□ 0.2
DDX55-212ENST00000544738 ALKBH5Q6P6C2 394 aaKnown RBP16.27■□□□□ 0.2
DDX55-212ENST00000544738 ARHGAP36Q6ZRI8 547 aa16.27■□□□□ 0.2
DDX55-212ENST00000544738 RAB11FIP2Q7L804 512 aa16.27■□□□□ 0.2
DDX55-212ENST00000544738 VASH2Q86V25 355 aa16.27■□□□□ 0.2
DDX55-212ENST00000544738 RBFAQ8N0V3 343 aa16.27■□□□□ 0.2
DDX55-212ENST00000544738 SDR16C5Q8N3Y7 309 aa16.27■□□□□ 0.2
DDX55-212ENST00000544738 FSTL5Q8N475 847 aaPredicted RBP16.27■□□□□ 0.2
DDX55-212ENST00000544738 NSMCE1Q8WV22 266 aa16.27■□□□□ 0.2
DDX55-212ENST00000544738 SCG3Q8WXD2 468 aaKnown RBP16.27■□□□□ 0.2
DDX55-212ENST00000544738 CSPG4P5Q96PW8 444 aa16.27■□□□□ 0.2
DDX55-212ENST00000544738 CCDC3Q9BQI4 270 aa16.27■□□□□ 0.2
DDX55-212ENST00000544738 APOOQ9BUR5 198 aa16.27■□□□□ 0.2
DDX55-212ENST00000544738 NUP85Q9BW27 656 aa16.27■□□□□ 0.2
DDX55-212ENST00000544738 GEMIN8Q9NWZ8 242 aaKnown RBP16.27■□□□□ 0.2
DDX55-212ENST00000544738 SEPT10Q9P0V9 454 aa16.27■□□□□ 0.2
DDX55-212ENST00000544738 ANAPC7Q9UJX3 599 aa16.27■□□□□ 0.2
DDX55-212ENST00000544738 PCDHGA7Q9Y5G6 932 aa16.27■□□□□ 0.2
DDX55-212ENST00000544738 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.27■□□□□ 0.27e-7■■□□□ 13.9
DDX55-212ENST00000544738 A0A087X0T9 212 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 AGRPO00253 132 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 TRAFD1O14545 582 aaPredicted RBP16.26■□□□□ 0.19
DDX55-212ENST00000544738 GCATO75600 419 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 RASGRP1O95267 797 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 ALPIP09923 528 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 ELFN1P0C7U0 828 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 FAM228BP0C875 321 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 CTSEP14091 401 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 HGFP14210 728 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 NFKBIAP25963 317 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 HK3P52790 923 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 PDX1P52945 283 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 SLC10A7Q0GE19 358 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 MTM1Q13496 603 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 C1orf61Q13536 156 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 NFATC4Q14934 902 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 HADHQ16836 314 aaKnown RBP16.26■□□□□ 0.19
DDX55-212ENST00000544738 CCDC122Q5T0U0 273 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 LVRNQ6Q4G3 990 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 ZSWIM9Q86XI8 627 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 LRRC49Q8IUZ0 686 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 WDR48Q8TAF3 677 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 SPOCK2Q92563 424 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 LRRC61Q9BV99 259 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 BOCQ9BWV1 1114 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 EPN3Q9H201 632 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 TCEAL2Q9H3H9 227 aaPredicted RBP16.26■□□□□ 0.19
DDX55-212ENST00000544738 IFNKQ9P0W0 207 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 RCOR3Q9P2K3 495 aaPredicted RBP16.26■□□□□ 0.19
DDX55-212ENST00000544738 DOLKQ9UPQ8 538 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 PCDHGA4Q9Y5G9 962 aa16.26■□□□□ 0.19
DDX55-212ENST00000544738 SPTBN1Q01082 2364 aaKnown RBP16.26■□□□□ 0.19
DDX55-212ENST00000544738 YY2O15391 372 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 SOCS5O75159 536 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 GYPCP04921 128 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 TCF4P15884 667 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 TSHRP16473 764 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 CDH6P55285 790 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 RALGPS1Q5JS13 557 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 HIST2H2BCQ6DN03 193 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 ESRP1Q6NXG1 681 aaKnown RBP16.25■□□□□ 0.19
DDX55-212ENST00000544738 ENPP7Q6UWV6 458 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 LIPIQ6XZB0 460 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 DPPA4Q7L190 304 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 B3GNT8Q7Z7M8 397 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 HID1Q8IV36 788 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 TP53INP2Q8IXH6 220 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 ATPAF2Q8N5M1 289 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 NAT6Q93015 286 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 LIN37Q96GY3 246 aaPredicted RBP16.25■□□□□ 0.19
DDX55-212ENST00000544738 PSMG3-AS1Q96PY0 264 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 NUDCD1Q96RS6 583 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 FOXP3Q9BZS1 431 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 PCDH18Q9HCL0 1135 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 ETNK2Q9NVF9 386 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 KCTD5Q9NXV2 234 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 PISDQ9UG56 409 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 LCMT1Q9UIC8 334 aa16.25■□□□□ 0.19
DDX55-212ENST00000544738 PNMA8BQ9ULN7 279 aaPredicted RBP16.25■□□□□ 0.19
DDX55-212ENST00000544738 BLACEA4D250 179 aa16.24■□□□□ 0.19
DDX55-212ENST00000544738 MAFKO60675 156 aa16.24■□□□□ 0.19
DDX55-212ENST00000544738 RECQL5O94762 991 aaPredicted RBP16.24■□□□□ 0.19
DDX55-212ENST00000544738 PRKCGP05129 697 aa16.24■□□□□ 0.19
DDX55-212ENST00000544738 JMJD7P0C870 316 aa16.24■□□□□ 0.19
DDX55-212ENST00000544738 LIPCP11150 499 aa16.24■□□□□ 0.19
DDX55-212ENST00000544738 KELP23276 732 aa16.24■□□□□ 0.19
DDX55-212ENST00000544738 HNRNPH3P31942 346 aaKnown RBP16.24■□□□□ 0.19
DDX55-212ENST00000544738 CASP14P31944 242 aa16.24■□□□□ 0.19
DDX55-212ENST00000544738 SSR1P43307 286 aaKnown RBP16.24■□□□□ 0.19
DDX55-212ENST00000544738 SRP54P61011 504 aaKnown RBP16.24■□□□□ 0.19
DDX55-212ENST00000544738 FOXK1P85037 733 aa16.24■□□□□ 0.19
DDX55-212ENST00000544738 SLC25A11Q02978 314 aaKnown RBP16.24■□□□□ 0.19
DDX55-212ENST00000544738 KRT81Q14533 505 aa16.24■□□□□ 0.19
DDX55-212ENST00000544738 ALG11Q2TAA5 492 aa16.24■□□□□ 0.19
DDX55-212ENST00000544738 SKOR2Q2VWA4 1001 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms