RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-231ENST00000544639 FJX1Q86VR8 437 aa4.29□□□□□ -1.72
RAP1B-231ENST00000544639 ZC3HC1Q86WB0 502 aaKnown RBP4.29□□□□□ -1.72
RAP1B-231ENST00000544639 CLIP4Q8N3C7 705 aa4.29□□□□□ -1.72
RAP1B-231ENST00000544639 PDILTQ8N807 584 aa4.29□□□□□ -1.72
RAP1B-231ENST00000544639 FAM216AQ8WUB2 273 aa4.29□□□□□ -1.72
RAP1B-231ENST00000544639 ARHGEF26Q96DR7 871 aa4.29□□□□□ -1.72
RAP1B-231ENST00000544639 ZNF479Q96JC4 524 aa4.29□□□□□ -1.72
RAP1B-231ENST00000544639 PPP1R13BQ96KQ4 1090 aa4.29□□□□□ -1.72
RAP1B-231ENST00000544639 TREX2Q9BQ50 279 aaPredicted RBP4.29□□□□□ -1.72
RAP1B-231ENST00000544639 NTPCRQ9BSD7 190 aaKnown RBP4.29□□□□□ -1.72
RAP1B-231ENST00000544639 HAUS8Q9BT25 410 aa4.29□□□□□ -1.72
RAP1B-231ENST00000544639 IFIH1Q9BYX4 1025 aaKnown RBP4.29□□□□□ -1.72
RAP1B-231ENST00000544639 KCNN2Q9H2S1 579 aa4.29□□□□□ -1.72
RAP1B-231ENST00000544639 GPR108Q9NPR9 543 aa4.29□□□□□ -1.72
RAP1B-231ENST00000544639 HINT3Q9NQE9 182 aaKnown RBP4.29□□□□□ -1.72
RAP1B-231ENST00000544639 TBC1D22BQ9NU19 505 aa4.29□□□□□ -1.72
RAP1B-231ENST00000544639 CNOT8Q9UFF9 292 aaKnown RBP4.29□□□□□ -1.72
RAP1B-231ENST00000544639 RCOR1Q9UKL0 485 aa4.29□□□□□ -1.72
RAP1B-231ENST00000544639 A0A0U1RQJ8 604 aa4.28□□□□□ -1.72
RAP1B-231ENST00000544639 CPED1A4D0V7 1026 aa4.28□□□□□ -1.72
RAP1B-231ENST00000544639 LINC01553A4QN01 128 aa4.28□□□□□ -1.72
RAP1B-231ENST00000544639 SMAD6O43541 496 aaKnown RBP4.28□□□□□ -1.72
RAP1B-231ENST00000544639 KCNJ13O60928 360 aa4.28□□□□□ -1.72
RAP1B-231ENST00000544639 ITGB8P26012 769 aa4.28□□□□□ -1.72
RAP1B-231ENST00000544639 CDKN2AP42771 156 aaKnown RBP4.28□□□□□ -1.72
RAP1B-231ENST00000544639 THBS3P49746 956 aa4.28□□□□□ -1.72
RAP1B-231ENST00000544639 METAP2P50579 478 aaKnown RBP eCLIP4.28□□□□□ -1.72
RAP1B-231ENST00000544639 NANOS2P60321 138 aaKnown RBP4.28□□□□□ -1.72
RAP1B-231ENST00000544639 ARF3P61204 181 aaPredicted RBP4.28□□□□□ -1.72
RAP1B-231ENST00000544639 ARF1P84077 181 aaKnown RBP4.28□□□□□ -1.72
RAP1B-231ENST00000544639 TRAF2Q12933 501 aa4.28□□□□□ -1.72
RAP1B-231ENST00000544639 PLCB4Q15147 1175 aa4.28□□□□□ -1.72
RAP1B-231ENST00000544639 EIF2S3LQ2VIR3 472 aaKnown RBP4.28□□□□□ -1.72
RAP1B-231ENST00000544639 PQLC2Q6ZP29 291 aa4.28□□□□□ -1.72
RAP1B-231ENST00000544639 IKBIPQ70UQ0 350 aa4.28□□□□□ -1.72
RAP1B-231ENST00000544639 CCDC13Q8IYE1 715 aa4.28□□□□□ -1.72
RAP1B-231ENST00000544639 IQCF1Q8N6M8 205 aa4.28□□□□□ -1.72
RAP1B-231ENST00000544639 ELP5Q8TE02 316 aa4.28□□□□□ -1.72
RAP1B-231ENST00000544639 TMEM68Q96MH6 324 aa4.28□□□□□ -1.72
RAP1B-231ENST00000544639 TMEM204Q9BSN7 226 aa4.28□□□□□ -1.72
RAP1B-231ENST00000544639 WACQ9BTA9 647 aa4.28□□□□□ -1.72
RAP1B-231ENST00000544639 NDST4Q9H3R1 872 aa4.28□□□□□ -1.72
RAP1B-231ENST00000544639 PLEKHA5Q9HAU0 1116 aa4.28□□□□□ -1.72
RAP1B-231ENST00000544639 HCFC1R1Q9NWW0 138 aa4.28□□□□□ -1.72
RAP1B-231ENST00000544639 WNT16Q9UBV4 365 aa4.28□□□□□ -1.72
RAP1B-231ENST00000544639 CORO1CQ9ULV4 474 aaPredicted RBP4.28□□□□□ -1.72
RAP1B-231ENST00000544639 LYVE1Q9Y5Y7 322 aa4.28□□□□□ -1.72
RAP1B-231ENST00000544639 IGLV5-52A0A0A0MRZ9 124 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 NDUFS7O75251 213 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 PRSS2P07478 247 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 NGFRP08138 427 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 ACAA1P09110 424 aaPredicted RBP4.27□□□□□ -1.73
RAP1B-231ENST00000544639 SNHG28P0DPA3 235 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 G6PDP11413 515 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 DDX5P17844 614 aaKnown RBP4.27□□□□□ -1.73
RAP1B-231ENST00000544639 CASP2P42575 452 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 LTBQ06643 244 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 CDONQ4KMG0 1287 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 MZT2BQ6NZ67 158 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 METTL2BQ6P1Q9 378 aaKnown RBP4.27□□□□□ -1.73
RAP1B-231ENST00000544639 PDXDC1Q6P996 788 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 FOXRED2Q8IWF2 684 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 SAMD14Q8IZD0 417 aaPredicted RBP4.27□□□□□ -1.73
RAP1B-231ENST00000544639 DSELQ8IZU8 1212 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 SPATA6LQ8N4H0 392 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 WDTC1Q8N5D0 677 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 RRNAD1Q96FB5 475 aaKnown RBP4.27□□□□□ -1.73
RAP1B-231ENST00000544639 METTL2AQ96IZ6 378 aaKnown RBP4.27□□□□□ -1.73
RAP1B-231ENST00000544639 LYZL4Q96KX0 146 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 C1orf74Q96LT6 269 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 BARD1Q99728 777 aaKnown RBP4.27□□□□□ -1.73
RAP1B-231ENST00000544639 SEZ6LQ9BYH1 1024 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 SPRY4Q9C004 299 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 PDZD7Q9H5P4 517 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 PPP1R3EQ9H7J1 279 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 C17orf75Q9HAS0 396 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 RANGRFQ9HD47 186 aaPredicted RBP4.27□□□□□ -1.73
RAP1B-231ENST00000544639 MMP25Q9NPA2 562 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 CNGB3Q9NQW8 809 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 EIF2B3Q9NR50 452 aaKnown RBP4.27□□□□□ -1.73
RAP1B-231ENST00000544639 RRP7BPQ9NSQ0 103 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 SEPT11Q9NVA2 429 aaKnown RBP4.27□□□□□ -1.73
RAP1B-231ENST00000544639 SLC9A2Q9UBY0 812 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 TINAGQ9UJW2 476 aa4.27□□□□□ -1.73
RAP1B-231ENST00000544639 LAS1LQ9Y4W2 734 aaKnown RBP4.27□□□□□ -1.73
RAP1B-231ENST00000544639 RUSC2Q8N2Y8 1516 aa4.26□□□□□ -1.73
RAP1B-231ENST00000544639 FSD2A1L4K1 749 aa4.26□□□□□ -1.73
RAP1B-231ENST00000544639 A8MZ25 164 aa4.26□□□□□ -1.73
RAP1B-231ENST00000544639 GTPBP1O00178 669 aaKnown RBP4.26□□□□□ -1.73
RAP1B-231ENST00000544639 VCYO14598 125 aa4.26□□□□□ -1.73
RAP1B-231ENST00000544639 HCRTR2O43614 444 aa4.26□□□□□ -1.73
RAP1B-231ENST00000544639 DOK2O60496 412 aa4.26□□□□□ -1.73
RAP1B-231ENST00000544639 HNRNPCL1O60812 293 aaKnown RBP4.26□□□□□ -1.73
RAP1B-231ENST00000544639 SLC25A12O75746 678 aa4.26□□□□□ -1.73
RAP1B-231ENST00000544639 IGHV4-30-4P0DP06 118 aa4.26□□□□□ -1.73
RAP1B-231ENST00000544639 RARGP13631 454 aa4.26□□□□□ -1.73
RAP1B-231ENST00000544639 ZNF12P17014 697 aa4.26□□□□□ -1.73
RAP1B-231ENST00000544639 STX2P32856 288 aa4.26□□□□□ -1.73
RAP1B-231ENST00000544639 PPARGP37231 505 aaPredicted RBP4.26□□□□□ -1.73
RAP1B-231ENST00000544639 CLCN3P51790 818 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms