RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 MGAT1P26572 445 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 STX2P32856 288 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 MPLP40238 635 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 ELK3P41970 407 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 GRIA1P42261 906 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 IL12RB1P42701 662 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 MESP2Q0VG99 397 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 CAMK2GQ13555 558 aaPredicted RBP9.55□□□□□ -0.88
YBX3-215ENST00000544504 FRG1Q14331 258 aaKnown RBP9.55□□□□□ -0.88
YBX3-215ENST00000544504 KCTD19Q17RG1 926 aaPredicted RBP9.55□□□□□ -0.88
YBX3-215ENST00000544504 SKIDA1Q1XH10 827 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 ZNF805Q5CZA5 627 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 C9orf64Q5T6V5 341 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 PKN3Q6P5Z2 889 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 TXNDC11Q6PKC3 985 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 CYS1Q717R9 158 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 KDELC2Q7Z4H8 507 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 CAMK1DQ8IU85 385 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 LPCAT1Q8NF37 534 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 OR6K2Q8NGY2 324 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 GABRG3Q99928 467 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 APOL2Q9BQE5 337 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 KIFC1Q9BW19 673 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 SCNM1Q9BWG6 230 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 VPS37BQ9H9H4 285 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 MAGEE1Q9HCI5 957 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 FBRSL1Q9HCM7 1045 aaKnown RBP9.55□□□□□ -0.88
YBX3-215ENST00000544504 CACNA2D2Q9NY47 1150 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 NINJ2Q9NZG7 142 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 SCML1Q9UN30 329 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 SOX13Q9UN79 622 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 CHMP2BQ9UQN3 213 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 PPIL1Q9Y3C6 166 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 WASF2Q9Y6W5 498 aa9.55□□□□□ -0.88
YBX3-215ENST00000544504 A0A0J9YYE9 177 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 TTC24A2A3L6 582 aaPredicted RBP9.54□□□□□ -0.88
YBX3-215ENST00000544504 TRAFD1O14545 582 aaPredicted RBP9.54□□□□□ -0.88
YBX3-215ENST00000544504 GIPC1O14908 333 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 RIPK2O43353 540 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 ATG13O75143 517 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 AVILO75366 819 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 LEFTY1O75610 366 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 PIGNO95427 931 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 EGFP01133 1207 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 TRBC1P01850 177 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 NUDT17P0C025 328 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 CEACAM1P13688 526 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 HOXB2P14652 356 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 PRKCHP24723 683 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 ITGB7P26010 798 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 TIE1P35590 1138 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 HSD17B3P37058 310 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 CHRNA4P43681 627 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 ZBTB16Q05516 673 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 IFFO1Q0D2I5 559 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 ELP6Q0PNE2 266 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 NAB1Q13506 487 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 CCINQ13939 588 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 SEPT6Q14141 434 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 GALNT3Q14435 633 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 STAT4Q14765 748 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 CASP8Q14790 479 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 POU6F1Q14863 301 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 TAF1AQ15573 450 aaPredicted RBP9.54□□□□□ -0.88
YBX3-215ENST00000544504 KYNUQ16719 465 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 QPCTQ16769 361 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 KLHL38Q2WGJ6 581 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 MSS51Q4VC12 460 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 ARSIQ5FYB1 569 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 CERCAMQ5T4B2 595 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 ZDHHC20Q5W0Z9 365 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 STEAP4Q687X5 459 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 ZNF776Q68DI1 518 aaPredicted RBP9.54□□□□□ -0.88
YBX3-215ENST00000544504 NAIF1Q69YI7 327 aaPredicted RBP9.54□□□□□ -0.88
YBX3-215ENST00000544504 ERAP2Q6P179 960 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 LRIG3Q6UXM1 1119 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 Q6ZS52 159 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 C3orf62Q6ZUJ4 267 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 TMEM135Q86UB9 458 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 KBTBD6Q86V97 674 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 ANKMY2Q8IV38 441 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 LMNTD2Q8IXW0 634 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 RAVER1Q8IY67 606 aaKnown RBP9.54□□□□□ -0.88
YBX3-215ENST00000544504 STK40Q8N2I9 435 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 CHST14Q8NCH0 376 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 OR2T3Q8NH03 318 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 GSDMBQ8TAX9 411 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 PIP4K2CQ8TBX8 421 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 GRIN3AQ8TCU5 1115 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 STYXQ8WUJ0 223 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 PIH1D2Q8WWB5 315 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 CDKL2Q92772 493 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 RAB7BQ96AH8 199 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 SCRN2Q96FV2 425 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 ZC3H10Q96K80 434 aaKnown RBP9.54□□□□□ -0.88
YBX3-215ENST00000544504 C9orf72Q96LT7 481 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 PWWP2AQ96N64 755 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 KLHL32Q96NJ5 620 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 LYSMD1Q96S90 227 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 CYTH2Q99418 400 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms