RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 C1SP09871 688 aa14.48□□□□□ -0.09
TNFRSF1A-216ENST00000543995 HNRNPA2B1P22626 353 aaKnown RBP14.48□□□□□ -0.09
TNFRSF1A-216ENST00000543995 ETV3P41162 512 aa14.48□□□□□ -0.09
TNFRSF1A-216ENST00000543995 NBL1P41271 181 aa14.48□□□□□ -0.09
TNFRSF1A-216ENST00000543995 STC1P52823 247 aa14.48□□□□□ -0.09
TNFRSF1A-216ENST00000543995 FGL2Q14314 439 aa14.48□□□□□ -0.09
TNFRSF1A-216ENST00000543995 CDKN3Q16667 212 aa14.48□□□□□ -0.09
TNFRSF1A-216ENST00000543995 ANKRD22Q5VYY1 191 aa14.48□□□□□ -0.09
TNFRSF1A-216ENST00000543995 DNASE2BQ8WZ79 361 aa14.48□□□□□ -0.09
TNFRSF1A-216ENST00000543995 PIGKQ92643 395 aa14.48□□□□□ -0.09
TNFRSF1A-216ENST00000543995 NUS1Q96E22 293 aa14.48□□□□□ -0.09
TNFRSF1A-216ENST00000543995 SNF8Q96H20 258 aa14.48□□□□□ -0.09
TNFRSF1A-216ENST00000543995 LOXL4Q96JB6 756 aa14.48□□□□□ -0.09
TNFRSF1A-216ENST00000543995 RAB17Q9H0T7 212 aa14.48□□□□□ -0.09
TNFRSF1A-216ENST00000543995 CASS4Q9NQ75 786 aa14.48□□□□□ -0.09
TNFRSF1A-216ENST00000543995 AASDHPPTQ9NRN7 309 aa14.48□□□□□ -0.09
TNFRSF1A-216ENST00000543995 PKD2L2Q9NZM6 624 aa14.48□□□□□ -0.09
TNFRSF1A-216ENST00000543995 DMTF1Q9Y222 760 aa14.48□□□□□ -0.09
TNFRSF1A-216ENST00000543995 C2orf81A6NN90 581 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 C10orf142B7Z368 130 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 PRAMEF26H0Y7S4 382 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 GOLGA8MH3BSY2 632 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 AP3B1O00203 1094 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 AURKAO14965 403 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 CRTAMO95727 393 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 GNSP15586 552 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 AKT2P31751 481 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 MAGEA6P43360 314 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 SEPT6Q14141 434 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 STAT4Q14765 748 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 POU6F1Q14863 301 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 LRRC14Q15048 493 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 TAF1AQ15573 450 aaPredicted RBP14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 RNASEH2BQ5TBB1 312 aaKnown RBP14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 LAIR1Q6GTX8 287 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 Q6ZVL8 140 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 MMGT1Q8N4V1 131 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 ZCCHC9Q8N567 271 aaKnown RBP14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 NOA1Q8NC60 698 aaKnown RBP14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 BRSK1Q8TDC3 778 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 COQ10AQ96MF6 247 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 ERP44Q9BS26 406 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 LRRC1Q9BTT6 524 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 DPH5Q9H2P9 285 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 KCTD5Q9NXV2 234 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 RAPGEFL1Q9UHV5 662 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 CD84Q9UIB8 345 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 SNX24Q9Y343 169 aa14.47□□□□□ -0.09
TNFRSF1A-216ENST00000543995 BCAT2O15382 392 aaPredicted RBP14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 TMEM63AO94886 807 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 LMNAP02545 664 aaKnown RBP14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 PCCBP05166 539 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 GM2AP17900 193 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 DPP6P42658 865 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 SPINT3P49223 89 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 SESN2P58004 480 aaPredicted RBP14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 SLC7A5Q01650 507 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 IRF4Q15306 451 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 CERCAMQ5T4B2 595 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 LRRC8BQ6P9F7 803 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 TMC3Q7Z5M5 1100 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 SYT12Q8IV01 421 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 NAT8LQ8N9F0 302 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 BBOF1Q8ND07 529 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 ASB12Q8WXK4 309 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 DTD2Q96FN9 168 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 SLC6A18Q96N87 628 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 L2HGDHQ9H9P8 463 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 BPIFA1Q9NP55 256 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 TMEM74BQ9NUR3 256 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 SUSD2Q9UGT4 822 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 GMEB2Q9UKD1 530 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 PILRBQ9UKJ0 227 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 CA5BQ9Y2D0 317 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 PKP3Q9Y446 797 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 ARL5AQ9Y689 179 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 SDK1Q7Z5N4 2213 aa14.46□□□□□ -0.09
TNFRSF1A-216ENST00000543995 FPGTO14772 594 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 NDC80O14777 642 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 RAD51BO15315 384 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 STX7O15400 261 aaKnown RBP14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 BUD23O43709 281 aaKnown RBP14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 EPN2O95208 641 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 LPOP22079 712 aaPredicted RBP14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 IVDP26440 423 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 HMGCLP35914 325 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 RPL21P46778 160 aaKnown RBP14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 ITGA8P53708 1063 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 CLDN2P57739 230 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 RACK1P63244 317 aaKnown RBP14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PDE1BQ01064 536 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 CALCOCO2Q13137 446 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 MSLNQ13421 630 aaPredicted RBP14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 MTM1Q13496 603 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 MORF4L2Q15014 288 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 AGERQ15109 404 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 WSCD2Q2TBF2 565 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 RFLNAQ6ZTI6 216 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 TECPR1Q7Z6L1 1165 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms