RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 ARF1P84077 181 aaKnown RBP6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 PRR23BQ6ZRT6 265 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 ZNF621Q6ZSS3 439 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 SLC41A1Q8IVJ1 513 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 DSELQ8IZU8 1212 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 CAVIN3Q969G5 261 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 RELTQ969Z4 430 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 VPS33AQ96AX1 596 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 MBOAT7Q96N66 472 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 CATSPER2Q96P56 530 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 WRAP53Q9BUR4 548 aaKnown RBP6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 TGIF2Q9GZN2 237 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 KLHL3Q9UH77 587 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 BTNL10A8MVZ5 291 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 TPP1O14773 563 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 ULK1O75385 1050 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 NOS3P29474 1203 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 SPAM1P38567 509 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 PRKAG1P54619 331 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 ATP6V0D1P61421 351 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 JAG1P78504 1218 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 CRYMQ14894 314 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 XKR6Q5GH73 641 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 TRIM69Q86WT6 500 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 MTFMTQ96DP5 389 aaKnown RBP6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 SAMD11Q96NU1 681 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 HERPUD2Q9BSE4 406 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 TMEM120AQ9BXJ8 343 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 POLR1DQ9Y2S0 133 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 AKAP12Q02952 1782 aa6.91□□□□□ -1.3
SRGAP1-206ENST00000543397 PEAK1Q9H792 1746 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 FAM220BPB1ANY3 271 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 CCNDBP1O95273 360 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 MLYCDO95822 493 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 CSF2RAP15509 400 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 ITGAXP20702 1163 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 MAT2AP31153 395 aaKnown RBP6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 CXCR3P49682 368 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 CLK3P49761 638 aaKnown RBP6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 NAA20P61599 178 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 HTRA3P83110 453 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 PLOD1Q02809 727 aaPredicted RBP6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 RUNX1T1Q06455 604 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 COTL1Q14019 142 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 FNBP1LQ5T0N5 605 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 ARHGAP17Q68EM7 881 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 ZNF544Q6NX49 715 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 TMEM132CQ8N3T6 1108 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 KIF2BQ8N4N8 673 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 TEX9Q8N6V9 391 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 OR4K2Q8NGD2 314 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 RPL10LQ96L21 214 aaKnown RBP6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 TMEM237Q96Q45 408 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 EBNA1BP2Q99848 306 aaKnown RBP6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 MYLK2Q9H1R3 596 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 RNF39Q9H2S5 420 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 LRRC19Q9H756 370 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 ABCB8Q9NUT2 735 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 CCDC154A6NI56 674 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 AP5Z1O43299 807 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 USP1O94782 785 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 OR6A2O95222 327 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 PIGNO95427 931 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 CFIP05156 583 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 PCCBP05166 539 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 MTHFD1P11586 935 aaKnown RBP6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 PCSK2P16519 638 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 ATP5F1P24539 256 aaPredicted RBP6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 DDX6P26196 483 aaKnown RBP eCLIP6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 TARSP26639 723 aaKnown RBP6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 AKT2P31751 481 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 HNRNPH3P31942 346 aaKnown RBP6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 BLKP51451 505 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 NAGLUP54802 743 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 ENPEPQ07075 957 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 CTBP1Q13363 440 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 RASA2Q15283 850 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 GSTA3Q16772 222 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 C17orf64Q86WR6 236 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 KRT73Q86Y46 540 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 SLC22A17Q8WUG5 538 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 HMGB4Q8WW32 186 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 PCDHB18PQ96TA0 734 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 PRDM4Q9UKN5 801 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 YJEFN3A6XGL0 299 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 RHPN2P1A8MT19 583 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 E7ENQ6 273 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 FPGTO14772 594 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 PAPSS1O43252 624 aaPredicted RBP6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 MFSD11O43934 449 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 AVILO75366 819 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 LRCH4O75427 683 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 ATP6V1B1P15313 513 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 CTHP32929 405 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 CCT8P50990 548 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 RAB10P61026 200 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 FASTKQ14296 549 aaKnown RBP6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 TAF5Q15542 800 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 SF1Q15637 639 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms