RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 COL6A2P12110 1019 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 CRABP2P29373 138 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 SLC8A1P32418 973 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 PEX19P40855 299 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 ABL2P42684 1182 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 EPHB1P54762 984 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 TMPRSS15P98073 1019 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 ACTN3Q08043 901 aaPredicted RBP9.34□□□□□ -0.91
GNE-206ENST00000543356 USP10Q14694 798 aaKnown RBP9.34□□□□□ -0.91
GNE-206ENST00000543356 TYSND1Q2T9J0 566 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 CCDC153Q494R4 210 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 TAF1BQ53T94 588 aaPredicted RBP9.34□□□□□ -0.91
GNE-206ENST00000543356 PPM1JQ5JR12 505 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 N4BP2L1Q5TBK1 243 aaPredicted RBP9.34□□□□□ -0.91
GNE-206ENST00000543356 TMEM215Q68D42 235 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 SLC41A1Q8IVJ1 513 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 MFSD6LQ8IWD5 586 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 ETFBKMTQ8IXQ9 262 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 OR4K2Q8NGD2 314 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 OR6K2Q8NGY2 324 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 OR4L1Q8NH43 312 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 E2F7Q96AV8 911 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 ECHDC3Q96DC8 303 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 SEC16BQ96JE7 1060 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 MRGPRX3Q96LB0 322 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 SIRPGQ9P1W8 387 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 MARCH4Q9P2E8 410 aaPredicted RBP9.34□□□□□ -0.91
GNE-206ENST00000543356 CDH7Q9ULB5 785 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 G3BP2Q9UN86 482 aaKnown RBP9.34□□□□□ -0.91
GNE-206ENST00000543356 CAPN7Q9Y6W3 813 aa9.34□□□□□ -0.91
GNE-206ENST00000543356 LAMA2P24043 3122 aaKnown RBP9.34□□□□□ -0.91
GNE-206ENST00000543356 A0A0J9YYE9 177 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 A0A1W2PQ67 120 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 OR51F1A6NGY5 319 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 CAPN8A6NHC0 703 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 BUD23O43709 281 aaKnown RBP9.33□□□□□ -0.92
GNE-206ENST00000543356 EDF1O60869 148 aaKnown RBP9.33□□□□□ -0.92
GNE-206ENST00000543356 S1PR4O95977 384 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 TOP3BO95985 862 aaKnown RBP9.33□□□□□ -0.92
GNE-206ENST00000543356 TRBC1P01850 177 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 PROCP04070 461 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 SRPRAP08240 638 aaKnown RBP9.33□□□□□ -0.92
GNE-206ENST00000543356 DGKGP49619 791 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 RAB10P61026 200 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 PTPRCAPQ14761 206 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 RBBP5Q15291 538 aaKnown RBP9.33□□□□□ -0.92
GNE-206ENST00000543356 DLG2Q15700 870 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 GEN1Q17RS7 908 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 TRIM68Q6AZZ1 485 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 CACNA2D3Q8IZS8 1091 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 RYBPQ8N488 228 aaPredicted RBP9.33□□□□□ -0.92
GNE-206ENST00000543356 NAT16Q8N8M0 369 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 TSPAN17Q96FV3 270 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 ZNF641Q96N77 438 aaPredicted RBP9.33□□□□□ -0.92
GNE-206ENST00000543356 MANSC1Q9H8J5 431 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 INTS10Q9NVR2 710 aaKnown RBP9.33□□□□□ -0.92
GNE-206ENST00000543356 THG1LQ9NWX6 298 aaKnown RBP9.33□□□□□ -0.92
GNE-206ENST00000543356 TLK1Q9UKI8 766 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 STARD13Q9Y3M8 1113 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 PCDHGA4Q9Y5G9 962 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 A0A087X1B8 175 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 WDR91A4D1P6 747 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 EBAG9O00559 213 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 SNX3O60493 162 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 POP4O95707 220 aaKnown RBP9.33□□□□□ -0.92
GNE-206ENST00000543356 BPGMP07738 259 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 SLC35E2BP0CK96 405 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 ARSAP15289 507 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 STMN1P16949 149 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 STC1P52823 247 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 RAD51Q06609 339 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 ADAM15Q13444 863 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 ITIH4Q14624 930 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 TLDC1Q6P9B6 456 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 CNSTQ6PJW8 725 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 MICALCLQ6ZW33 695 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 SDCCAG8Q86SQ7 713 aaPredicted RBP9.33□□□□□ -0.92
GNE-206ENST00000543356 CCDC197Q8NCU1 140 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 ELMO2Q96JJ3 720 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 SMIM14Q96QK8 99 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 LYSMD1Q96S90 227 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 OMDQ99983 421 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 FAM83CQ9BQN1 747 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 APOL5Q9BWW9 433 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 C1QTNF1Q9BXJ1 281 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 PITPNM3Q9BZ71 974 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 SUDS3Q9H7L9 328 aaPredicted RBP9.33□□□□□ -0.92
GNE-206ENST00000543356 PPIL1Q9Y3C6 166 aa9.33□□□□□ -0.92
GNE-206ENST00000543356 STX7O15400 261 aaKnown RBP9.32□□□□□ -0.92
GNE-206ENST00000543356 APOA4P06727 396 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 BGNP21810 368 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 GKP32189 559 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 HMGCLP35914 325 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 IRF9Q00978 393 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 FCHO2Q0JRZ9 810 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 SEMA3AQ14563 771 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 GAB4Q2WGN9 574 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 FASTKD1Q53R41 847 aaKnown RBP9.32□□□□□ -0.92
GNE-206ENST00000543356 ZNF789Q5FWF6 425 aa9.32□□□□□ -0.92
GNE-206ENST00000543356 FAM45BPQ6NSW5 357 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms