RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 HOXC11O43248 304 aaPredicted RBP5.21□□□□□ -1.58
CLIP1-217ENST00000543205 PRPSAP2O60256 369 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 TBL1XO60907 577 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 HSPA4LO95757 839 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 SLC4A1P02730 911 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 TYRP14679 529 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 SLC6A4P31645 630 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 ADRA1BP35368 520 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 ARHGAP25P42331 645 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 MECP2P51608 486 aaKnown RBP5.21□□□□□ -1.58
CLIP1-217ENST00000543205 AIF1P55008 147 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 ARL4CP56559 192 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 STARD6P59095 220 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 ALDH6A1Q02252 535 aaKnown RBP5.21□□□□□ -1.58
CLIP1-217ENST00000543205 GRSF1Q12849 480 aaKnown RBP eCLIP5.21□□□□□ -1.58
CLIP1-217ENST00000543205 STARD3Q14849 445 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 BBS9Q3SYG4 887 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 NKAPLQ5M9Q1 402 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 RNF43Q68DV7 783 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 VSIG1Q86XK7 387 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 CPOQ8IVL8 374 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 PHACTR4Q8IZ21 702 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 FBXL6Q8N531 539 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 CCDC185Q8N715 623 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 NAT16Q8N8M0 369 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 HJURPQ8NCD3 748 aaPredicted RBP5.21□□□□□ -1.58
CLIP1-217ENST00000543205 GIMAP7Q8NHV1 300 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 RFFLQ8WZ73 363 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 CD101Q93033 1021 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 TMEM41AQ96HV5 264 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 C1orf74Q96LT6 269 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 RPRD1AQ96P16 312 aaPredicted RBP5.21□□□□□ -1.58
CLIP1-217ENST00000543205 MIPEPQ99797 713 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 P2RY13Q9BPV8 354 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 TRIM7Q9C029 511 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 CNTD2Q9H8S5 307 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 TBC1D17Q9HA65 648 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 DNAJC17Q9NVM6 304 aaKnown RBP5.21□□□□□ -1.58
CLIP1-217ENST00000543205 PLK2Q9NYY3 685 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 PCSK1NQ9UHG2 260 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 HS3ST4Q9Y661 456 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 A0A0A6YYK5 440 aaPredicted RBP5.2□□□□□ -1.58
CLIP1-217ENST00000543205 KANSL1LA0AUZ9 987 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 POM121BA6NF01 834 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 FAM170BA6NMN3 283 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 H0Y626 953 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 DYRK3O43781 588 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 SRGAP2O75044 1071 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 PROSCO94903 275 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 UBOX5O94941 541 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 PENKP01210 267 aaPredicted RBP5.2□□□□□ -1.58
CLIP1-217ENST00000543205 APODP05090 189 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 FAM87AP0C7U9 286 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 FSTP19883 344 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 CD72P21854 359 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 CTSSP25774 331 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 HTR1BP28222 390 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 MIPP30301 263 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 ADMP35318 185 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 PCK1P35558 622 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 PEX19P40855 299 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 EIF2DP41214 584 aaKnown RBP5.2□□□□□ -1.58
CLIP1-217ENST00000543205 SLC6A11P48066 632 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 GALK1P51570 392 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 SGSHP51688 502 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 AGFG1P52594 562 aaKnown RBP5.2□□□□□ -1.58
CLIP1-217ENST00000543205 VAV2P52735 878 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 KDSRQ06136 332 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 CCDC173Q0VFZ6 552 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 KIF5AQ12840 1032 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 AUHQ13825 339 aaKnown RBP5.2□□□□□ -1.58
CLIP1-217ENST00000543205 MESDQ14696 234 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 UBXN2BQ14CS0 331 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 PON2Q15165 354 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 HADHQ16836 314 aaKnown RBP5.2□□□□□ -1.58
CLIP1-217ENST00000543205 TMEM177Q53S58 311 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 MPP7Q5T2T1 576 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 ERMARDQ5T6L9 678 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 FYB2Q5VWT5 728 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 GRAMD4Q6IC98 578 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 FBXL22Q6P050 247 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 PGBD2Q6P3X8 592 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 USP45Q70EL2 814 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 ZAR1Q86SH2 424 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 MFN1Q8IWA4 741 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 SYTL1Q8IYJ3 562 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 CFAP52Q8N1V2 620 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 NIPA2Q8N8Q9 360 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 MFSD2AQ8NA29 543 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 CHST14Q8NCH0 376 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 NTAN1Q96AB6 310 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 CHFRQ96EP1 664 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 C1GALT1C1Q96EU7 318 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 PNKPQ96T60 521 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 PRMT1Q99873 361 aaKnown RBP5.2□□□□□ -1.58
CLIP1-217ENST00000543205 KCNH6Q9H252 994 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 LRFN1Q9P244 771 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 DEC1Q9P2X7 70 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 OR12D3Q9UGF7 316 aa5.2□□□□□ -1.58
CLIP1-217ENST00000543205 VANGL2Q9ULK5 521 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms