RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 LMLNQ96KR4 655 aa17.27■□□□□ 0.36
TMEM50B-210ENST00000542230 C2orf49Q9BVC5 232 aaPredicted RBP17.27■□□□□ 0.36
TMEM50B-210ENST00000542230 KCNK4Q9NYG8 393 aa17.27■□□□□ 0.36
TMEM50B-210ENST00000542230 ARIH1Q9Y4X5 557 aaPredicted RBP17.27■□□□□ 0.36
TMEM50B-210ENST00000542230 GOLGA8CPA6NN73 597 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 NEDD8-MDP1E9PL57 170 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 ZNF195O14628 629 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 FZD6O60353 706 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 OR1I1O60431 355 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 CRTAMO95727 393 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 KRT16P08779 473 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 PTPN2P17706 415 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 CA5AP35218 305 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 CLCN5P51795 746 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 EPHA5P54756 1037 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 NSUN2Q08J23 767 aaKnown RBP eCLIP17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 TAF1AQ15573 450 aaPredicted RBP17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 ZSWIM9Q86XI8 627 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 TXNDC5Q8NBS9 432 aaKnown RBP17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 SLC7A6OSQ96CW6 309 aaPredicted RBP17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 LRRC3BQ96PB8 259 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 GALPQ9UBC7 116 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 RASSF9O75901 435 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 PLK1P53350 603 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 EML3Q32P44 896 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 FUT11Q495W5 492 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 TREML1Q86YW5 311 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 TTC30BQ8N4P2 665 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 UTP4Q969X6 686 aaKnown RBP17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 PPP1R36Q96LQ0 422 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 CYP4F12Q9HCS2 524 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 TDP1Q9NUW8 608 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 CDH22Q9UJ99 828 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 MED16Q9Y2X0 877 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 WNT6Q9Y6F9 365 aa17.26■□□□□ 0.35
TMEM50B-210ENST00000542230 UBA6A0AVT1 1052 aaPredicted RBP17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 A8MUI8 341 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 GRK2P25098 689 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 MPSTP25325 297 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 FMO4P31512 558 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 STC1P52823 247 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 TUBB3Q13509 450 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 PEX6Q13608 980 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 SLC14A2Q15849 920 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 LYSMD3Q7Z3D4 306 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 NAT16Q8N8M0 369 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 ITFG1Q8TB96 612 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 PHOSPHO2Q8TCD6 241 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 MAPK15Q8TD08 544 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 PIH1D2Q8WWB5 315 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 UBXN10Q96LJ8 280 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 ADGRE3Q9BY15 652 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 KIAA1522Q9P206 1035 aaPredicted RBP17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 SLCO3A1Q9UIG8 710 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 PRUNE2Q8WUY3 3088 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 C2orf81A6NN90 581 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 WISP3O95389 354 aaPredicted RBP17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 CEBPBP17676 345 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 PMLP29590 882 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 ALDH18A1P54886 795 aaKnown RBP17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 UBAP2LQ14157 1087 aaKnown RBP17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 DBN1Q16643 649 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 PITRM1Q5JRX3 1037 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 RETSATQ6NUM9 610 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 GPR150Q8NGU9 434 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 RILPQ96NA2 401 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 TSNARE1Q96NA8 513 aa17.25■□□□□ 0.35
TMEM50B-210ENST00000542230 TRAFD1O14545 582 aaPredicted RBP17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 HSPA4LO95757 839 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 COL6A2P12110 1019 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 LPOP22079 712 aaPredicted RBP17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 POLD2P49005 469 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 EPHB1P54762 984 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 SETMARQ53H47 684 aaPredicted RBP17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 ARL13AQ5H913 290 aaPredicted RBP17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 PRSS36Q5K4E3 855 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 MPP7Q5T2T1 576 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 MRNIPQ6NTE8 343 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 LSMEM2Q8N112 164 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 CNPY4Q8N129 248 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 RYBPQ8N488 228 aaPredicted RBP17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 CCNYL1Q8N7R7 359 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 ZNF707Q96C28 371 aaPredicted RBP17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 FAM50BQ9Y247 325 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 ZNF510Q9Y2H8 683 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 A0A087X1B8 175 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 ZBTB14O43829 449 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 PGLSO95336 258 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 SRCP12931 536 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 NQO1P15559 274 aaKnown RBP17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 CES1P23141 567 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 WEE1P30291 646 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 MC4RP32245 332 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 PBX2P40425 430 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 LY6G5CQ5SRR4 150 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 LIPMQ5VYY2 423 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 WDR75Q8IWA0 830 aaKnown RBP17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 TTC8Q8TAM2 541 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 SORCS1Q8WY21 1168 aa17.24■□□□□ 0.35
TMEM50B-210ENST00000542230 PTERQ96BW5 349 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms