RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 C11orf16Q9NQ32 467 aa27.85■■■□□ 2.05
CCM2-218ENST00000541586 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP27.85■■■□□ 2.05
CCM2-218ENST00000541586 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP27.84■■■□□ 2.05
CCM2-218ENST00000541586 GOLGA8TH3BQL2 631 aa27.84■■■□□ 2.05
CCM2-218ENST00000541586 BRAFP15056 766 aa27.84■■■□□ 2.05
CCM2-218ENST00000541586 PAMP19021 973 aa27.84■■■□□ 2.05
CCM2-218ENST00000541586 GKP32189 559 aa27.84■■■□□ 2.05
CCM2-218ENST00000541586 MAGEA9P43362 315 aa27.84■■■□□ 2.05
CCM2-218ENST00000541586 KIAA0930Q6ICG6 404 aaPredicted RBP27.84■■■□□ 2.05
CCM2-218ENST00000541586 PACS1Q6VY07 963 aa27.84■■■□□ 2.05
CCM2-218ENST00000541586 NLRP9Q7RTR0 991 aa27.84■■■□□ 2.05
CCM2-218ENST00000541586 CHST14Q8NCH0 376 aa27.84■■■□□ 2.05
CCM2-218ENST00000541586 ZDBF2Q9HCK1 2354 aa27.84■■■□□ 2.05
CCM2-218ENST00000541586 TCRBV21S2A2A0A5A6 115 aa27.84■■■□□ 2.05
CCM2-218ENST00000541586 ANKRD66B4E2M5 251 aa27.84■■■□□ 2.05
CCM2-218ENST00000541586 KRT37O76014 449 aa27.84■■■□□ 2.05
CCM2-218ENST00000541586 PIGNO95427 931 aa27.84■■■□□ 2.05
CCM2-218ENST00000541586 SNRPAP09012 282 aaKnown RBP27.84■■■□□ 2.05
CCM2-218ENST00000541586 CXCL12P48061 93 aa27.84■■■□□ 2.05
CCM2-218ENST00000541586 SERPINB9P50453 376 aa27.84■■■□□ 2.05
CCM2-218ENST00000541586 SATB1Q01826 763 aa27.84■■■□□ 2.05
CCM2-218ENST00000541586 BCL2L1Q07817 233 aa27.84■■■□□ 2.05
CCM2-218ENST00000541586 LGSNQ5TDP6 509 aa27.84■■■□□ 2.05
CCM2-218ENST00000541586 HHIPQ96QV1 700 aa27.84■■■□□ 2.05
CCM2-218ENST00000541586 CNOT10Q9H9A5 744 aaKnown RBP27.84■■■□□ 2.05
CCM2-218ENST00000541586 IARS2Q9NSE4 1012 aaKnown RBP27.84■■■□□ 2.05
CCM2-218ENST00000541586 KCTD3Q9Y597 815 aa27.84■■■□□ 2.05
CCM2-218ENST00000541586 PCDHB9Q9Y5E1 797 aa27.84■■■□□ 2.05
CCM2-218ENST00000541586 SPO11Q9Y5K1 396 aa27.84■■■□□ 2.05
CCM2-218ENST00000541586 ARL5AQ9Y689 179 aa27.84■■■□□ 2.05
CCM2-218ENST00000541586 TRAFD1O14545 582 aaPredicted RBP27.83■■■□□ 2.05
CCM2-218ENST00000541586 KRT38O76015 456 aa27.83■■■□□ 2.05
CCM2-218ENST00000541586 GSRP00390 522 aa27.83■■■□□ 2.05
CCM2-218ENST00000541586 CCNHP51946 323 aaPredicted RBP27.83■■■□□ 2.05
CCM2-218ENST00000541586 CAMK2GQ13555 558 aaPredicted RBP27.83■■■□□ 2.05
CCM2-218ENST00000541586 LAMB3Q13751 1172 aa27.83■■■□□ 2.05
CCM2-218ENST00000541586 QPCTQ16769 361 aa27.83■■■□□ 2.05
CCM2-218ENST00000541586 OR13J1Q8NGT2 312 aa27.83■■■□□ 2.05
CCM2-218ENST00000541586 MDM1Q8TC05 714 aa27.83■■■□□ 2.05
CCM2-218ENST00000541586 SMIM14Q96QK8 99 aa27.83■■■□□ 2.05
CCM2-218ENST00000541586 CPNE1Q99829 537 aa27.83■■■□□ 2.05
CCM2-218ENST00000541586 SLC6A17Q9H1V8 727 aa27.83■■■□□ 2.05
CCM2-218ENST00000541586 ZDHHC6Q9H6R6 413 aa27.83■■■□□ 2.05
CCM2-218ENST00000541586 ATP13A3Q9H7F0 1226 aa27.83■■■□□ 2.05
CCM2-218ENST00000541586 POLMQ9NP87 494 aaPredicted RBP27.83■■■□□ 2.05
CCM2-218ENST00000541586 HMX2A2RU54 273 aa27.82■■■□□ 2.04
CCM2-218ENST00000541586 TRIM49D1C9J1S8 452 aa27.82■■■□□ 2.04
CCM2-218ENST00000541586 PGLSO95336 258 aa27.82■■■□□ 2.04
CCM2-218ENST00000541586 SLC8A1P32418 973 aa27.82■■■□□ 2.04
CCM2-218ENST00000541586 DGKEP52429 567 aa27.82■■■□□ 2.04
CCM2-218ENST00000541586 BMPR2Q13873 1038 aa27.82■■■□□ 2.04
CCM2-218ENST00000541586 MYLK3Q32MK0 819 aa27.82■■■□□ 2.04
CCM2-218ENST00000541586 ARMC12Q5T9G4 340 aa27.82■■■□□ 2.04
CCM2-218ENST00000541586 MMAAQ8IVH4 418 aaKnown RBP27.82■■■□□ 2.04
CCM2-218ENST00000541586 C4orf33Q8N1A6 199 aa27.82■■■□□ 2.04
CCM2-218ENST00000541586 PGBD3Q8N328 593 aa27.82■■■□□ 2.04
CCM2-218ENST00000541586 GRIN3AQ8TCU5 1115 aa27.82■■■□□ 2.04
CCM2-218ENST00000541586 OR8D1Q8WZ84 308 aa27.82■■■□□ 2.04
CCM2-218ENST00000541586 VOPP1Q96AW1 172 aa27.82■■■□□ 2.04
CCM2-218ENST00000541586 FAM129BQ96TA1 746 aa27.82■■■□□ 2.04
CCM2-218ENST00000541586 TXNDC16Q9P2K2 825 aa27.82■■■□□ 2.04
CCM2-218ENST00000541586 MUC22E2RYF6 1773 aaPredicted RBP27.82■■■□□ 2.04
CCM2-218ENST00000541586 HTRA2O43464 458 aaPredicted RBP27.81■■■□□ 2.04
CCM2-218ENST00000541586 SOCS5O75159 536 aa27.81■■■□□ 2.04
CCM2-218ENST00000541586 MT-ND3P03897 115 aa27.81■■■□□ 2.04
CCM2-218ENST00000541586 KRT4P19013 534 aa27.81■■■□□ 2.04
CCM2-218ENST00000541586 AVPR2P30518 371 aa27.81■■■□□ 2.04
CCM2-218ENST00000541586 GP5P40197 560 aa27.81■■■□□ 2.04
CCM2-218ENST00000541586 ELAVL3Q14576 367 aaKnown RBP27.81■■■□□ 2.04
CCM2-218ENST00000541586 TSTD1Q8NFU3 115 aa27.81■■■□□ 2.04
CCM2-218ENST00000541586 HMGB4Q8WW32 186 aa27.81■■■□□ 2.04
CCM2-218ENST00000541586 SMC6Q96SB8 1091 aa27.81■■■□□ 2.04
CCM2-218ENST00000541586 MKRN2Q9H000 416 aaKnown RBP27.81■■■□□ 2.04
CCM2-218ENST00000541586 KCNK9Q9NPC2 374 aa27.81■■■□□ 2.04
CCM2-218ENST00000541586 TMEM120BA0PK00 339 aa27.81■■■□□ 2.04
CCM2-218ENST00000541586 IL1BP01584 269 aa27.81■■■□□ 2.04
CCM2-218ENST00000541586 CNTFP26441 200 aa27.81■■■□□ 2.04
CCM2-218ENST00000541586 CCR3P51677 355 aa27.81■■■□□ 2.04
CCM2-218ENST00000541586 POM121L1PQ3SYA9 428 aa27.81■■■□□ 2.04
CCM2-218ENST00000541586 ARSIQ5FYB1 569 aa27.81■■■□□ 2.04
CCM2-218ENST00000541586 MROH9Q5TGP6 573 aa27.81■■■□□ 2.04
CCM2-218ENST00000541586 STRA8Q7Z7C7 330 aa27.81■■■□□ 2.04
CCM2-218ENST00000541586 TMPRSS6Q8IU80 811 aa27.81■■■□□ 2.04
CCM2-218ENST00000541586 OR2T3Q8NH03 318 aa27.81■■■□□ 2.04
CCM2-218ENST00000541586 MTBPQ96DY7 904 aa27.81■■■□□ 2.04
CCM2-218ENST00000541586 SERAC1Q96JX3 654 aa27.81■■■□□ 2.04
CCM2-218ENST00000541586 HEPHQ9BQS7 1158 aa27.81■■■□□ 2.04
CCM2-218ENST00000541586 IER2Q9BTL4 223 aa27.81■■■□□ 2.04
CCM2-218ENST00000541586 AURKAO14965 403 aa27.8■■■□□ 2.04
CCM2-218ENST00000541586 BUD23O43709 281 aaKnown RBP27.8■■■□□ 2.04
CCM2-218ENST00000541586 RNASEH1O60930 286 aaKnown RBP27.8■■■□□ 2.04
CCM2-218ENST00000541586 POP4O95707 220 aaKnown RBP27.8■■■□□ 2.04
CCM2-218ENST00000541586 PXNP49023 591 aaPredicted RBP27.8■■■□□ 2.04
CCM2-218ENST00000541586 COPAP53621 1224 aa27.8■■■□□ 2.04
CCM2-218ENST00000541586 EPHB1P54762 984 aa27.8■■■□□ 2.04
CCM2-218ENST00000541586 GUCY1A3Q02108 690 aa27.8■■■□□ 2.04
CCM2-218ENST00000541586 RAD51Q06609 339 aa27.8■■■□□ 2.04
CCM2-218ENST00000541586 GRTP1Q5TC63 336 aa27.8■■■□□ 2.04
CCM2-218ENST00000541586 TTC19Q6DKK2 380 aaPredicted RBP27.8■■■□□ 2.04
CCM2-218ENST00000541586 ANO7Q6IWH7 933 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms