RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 AUHQ13825 339 aaKnown RBP8.45□□□□□ -1.06
CHD4-208ENST00000540960 DDR2Q16832 855 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 TEX44Q53QW1 395 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 TNFAIP8L3Q5GJ75 292 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 WDR45BQ5MNZ6 344 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 EOGTQ5NDL2 527 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 KCTD16Q68DU8 428 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 IL27RAQ6UWB1 636 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 NPNTQ6UXI9 565 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 ZNF783Q6ZMS7 281 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 PTRH1Q86Y79 214 aaKnown RBP8.45□□□□□ -1.06
CHD4-208ENST00000540960 CCDC117Q8IWD4 279 aaPredicted RBP8.45□□□□□ -1.06
CHD4-208ENST00000540960 UMODL1-AS1Q8N2C9 162 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 ZNF557Q8N988 423 aaPredicted RBP8.45□□□□□ -1.06
CHD4-208ENST00000540960 FBXO36Q8NEA4 188 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 C1orf216Q8TAB5 229 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 NDRG1Q92597 394 aaKnown RBP8.45□□□□□ -1.06
CHD4-208ENST00000540960 ARHGEF2Q92974 986 aaKnown RBP8.45□□□□□ -1.06
CHD4-208ENST00000540960 C9orf72Q96LT7 481 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 ZNF599Q96NL3 588 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 GCNAQ96QF7 691 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 SMC6Q96SB8 1091 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 PLCD4Q9BRC7 762 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 SIK2Q9H0K1 926 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 GBA3Q9H227 469 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 EPB41L4BQ9H329 900 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 ETNK1Q9HBU6 452 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.45□□□□□ -1.06
CHD4-208ENST00000540960 RSPH14Q9UHP6 348 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 ZNF180Q9UJW8 692 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 HCN2Q9UL51 889 aa8.45□□□□□ -1.06
CHD4-208ENST00000540960 SDK2Q58EX2 2172 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 IGLV3-10A0A075B6K4 115 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 SLC12A8A0AV02 714 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 A1L4Q6 167 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 DRGXA6NNA5 263 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 F5H5T6 163 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 H0Y8X5 98 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 MFSD11O43934 449 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 TLR5O60602 858 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 AP2A1O95782 977 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 IGLV3-27P01718 113 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 POLBP06746 335 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 PGAM1P18669 254 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 KRT15P19012 456 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 HPDP32754 393 aaPredicted RBP8.44□□□□□ -1.06
CHD4-208ENST00000540960 DCTP40126 519 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 GNGT1P63211 74 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 EFEMP1Q12805 493 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 SLC10A2Q12908 348 aaPredicted RBP8.44□□□□□ -1.06
CHD4-208ENST00000540960 RFTN1Q14699 578 aaPredicted RBP8.44□□□□□ -1.06
CHD4-208ENST00000540960 SPANXN3Q5MJ09 141 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 MANEALQ5VSG8 457 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 LAYNQ6UX15 382 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 CCDC81Q6ZN84 652 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 METTL3Q86U44 580 aaKnown RBP8.44□□□□□ -1.06
CHD4-208ENST00000540960 SLC26A11Q86WA9 606 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 C12orf40Q86WS4 652 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 LRRC6Q86X45 466 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 GATAD2AQ86YP4 633 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 PYROXD2Q8N2H3 581 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 OR2W6PQ8NHA6 318 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 GSDMBQ8TAX9 411 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 CCDC110Q8TBZ0 833 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 DYDC1Q8WWB3 177 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 ATP2A3Q93084 1043 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 TTC17Q96AE7 1141 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 STAMBPL1Q96FJ0 436 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 TEKT5Q96M29 485 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 SLC22A12Q96S37 553 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 CYP2S1Q96SQ9 504 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 EBNA1BP2Q99848 306 aaKnown RBP8.44□□□□□ -1.06
CHD4-208ENST00000540960 DPH1Q9BZG8 443 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 IL22Q9GZX6 179 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 CD248Q9HCU0 757 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 INTS9Q9NV88 658 aaKnown RBP8.44□□□□□ -1.06
CHD4-208ENST00000540960 TMEM30AQ9NV96 361 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 TMEM248Q9NWD8 314 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 SEPT10Q9P0V9 454 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 TXNDC16Q9P2K2 825 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 EIF2B4Q9UI10 523 aaKnown RBP8.44□□□□□ -1.06
CHD4-208ENST00000540960 GGA2Q9UJY4 613 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 CLCA2Q9UQC9 943 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 TEX264Q9Y6I9 313 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 SPG11Q96JI7 2443 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 LRRK1Q38SD2 2015 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 SVILO95425 2214 aa8.44□□□□□ -1.06
CHD4-208ENST00000540960 ARID1BQ8NFD5 2236 aaPredicted RBP8.44□□□□□ -1.06
CHD4-208ENST00000540960 CXorf51AA0A1B0GTR3 108 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 A0A1W2PQF6 199 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 GMNCA6NCL1 334 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 FAM47DPA6NHR8 397 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 MEI4A8MW99 385 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 RASA4BC9J798 803 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 TM9SF1O15321 606 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 RASA4O43374 803 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 PCDHGA12O60330 932 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 RAMP2O60895 175 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 CLDN11O75508 207 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 FAM155BO75949 473 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms