RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 SUMF1Q8NBK3 374 aa17.54■□□□□ 0.4
CLSTN3-210ENST00000540931 MCUQ8NE86 351 aa17.54■□□□□ 0.4
CLSTN3-210ENST00000540931 SNX19Q92543 992 aa17.54■□□□□ 0.4
CLSTN3-210ENST00000540931 PEX13Q92968 403 aa17.54■□□□□ 0.4
CLSTN3-210ENST00000540931 NSMCE3Q96MG7 304 aa17.54■□□□□ 0.4
CLSTN3-210ENST00000540931 BFARQ9NZS9 450 aa17.54■□□□□ 0.4
CLSTN3-210ENST00000540931 PKP3Q9Y446 797 aa17.54■□□□□ 0.4
CLSTN3-210ENST00000540931 EML5Q05BV3 1969 aa17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 A0A1B0GTW7 788 aa17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 NPIPB15A6NHN6 443 aaPredicted RBP17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 FPGTO14772 594 aa17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 IGHV4-34P06331 123 aa17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 ATXN1LP0C7T5 689 aaKnown RBP17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 C6P13671 934 aa17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 TEAD1P28347 426 aa17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 HADHAP40939 763 aa17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 AFF3P51826 1226 aaKnown RBP17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 CAV1Q03135 178 aa17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 CALCOCO2Q13137 446 aa17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 GALNT3Q14435 633 aa17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 LRRC14Q15048 493 aa17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 ACOX1Q15067 660 aa17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 TAF1AQ15573 450 aaPredicted RBP17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 DUOXA1Q1HG43 343 aa17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 PEAR1Q5VY43 1037 aaPredicted RBP17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 LRRC66Q68CR7 880 aa17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 CRTC1Q6UUV9 634 aa17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 KDELC2Q7Z4H8 507 aa17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 GLT6D1Q7Z4J2 308 aa17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 JAMLQ86YT9 394 aa17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 CBARPQ8N350 705 aaPredicted RBP17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 PTCD2Q8WV60 388 aaKnown RBP17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 FAM129AQ9BZQ8 928 aa17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 ZDHHC5Q9C0B5 715 aa17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 IL22Q9GZX6 179 aa17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 CD93Q9NPY3 652 aa17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 NFKBIL1Q9UBC1 381 aaPredicted RBP17.53■□□□□ 0.4
CLSTN3-210ENST00000540931 MAGEB16A2A368 324 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 IGLON5A6NGN9 336 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 BCAT2O15382 392 aaPredicted RBP17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 MMP20O60882 483 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 AGTP01019 485 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 ZSCAN5DPP0CG00 497 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 ETS1P14921 441 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 CTPS1P17812 591 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 ITIH2P19823 946 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 PTGIRP43119 386 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 STC1P52823 247 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 DCDC1P59894 354 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 YPEL5P62699 121 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 DPTQ07507 201 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 RALGDSQ12967 914 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 IHHQ14623 411 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 MORF4L2Q15014 288 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 CNGA3Q16281 694 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 PDPK2PQ6A1A2 396 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 C8orf74Q6P047 294 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 LRRC8BQ6P9F7 803 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 TMC3Q7Z5M5 1100 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 SLC41A1Q8IVJ1 513 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 MMGT1Q8N4V1 131 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 SLC25A41Q8N5S1 370 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 FRMD1Q8N878 549 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 MFSD2AQ8NA29 543 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 SNF8Q96H20 258 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 SERAC1Q96JX3 654 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 PLEKHG4BQ96PX9 1271 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 GORASP1Q9BQQ3 440 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 ERP44Q9BS26 406 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 WRAP53Q9BUR4 548 aaKnown RBP17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 PILRBQ9UKJ0 227 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 RIMKLBQ9ULI2 386 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 ZNF711Q9Y462 761 aa17.52■□□□□ 0.4
CLSTN3-210ENST00000540931 SPAG17Q6Q759 2223 aa17.52■□□□□ 0.39
CLSTN3-210ENST00000540931 THADAQ6YHU6 1953 aa17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 HEATR9A2RTY3 570 aa17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 EFCAB8A8MWE9 144 aa17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 DNALI1O14645 258 aaPredicted RBP17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 SPINT1O43278 529 aa17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 DFNA5O60443 496 aa17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 RECQL5O94762 991 aaPredicted RBP17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 PAK4O96013 591 aaPredicted RBP17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 ALPIP09923 528 aa17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 TSHRP16473 764 aa17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 LPOP22079 712 aaPredicted RBP17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 DRG2P55039 364 aaKnown RBP17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 PTSQ03393 145 aa17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 SRSF5Q13243 272 aaKnown RBP17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 MTM1Q13496 603 aa17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 PTK2BQ14289 1009 aa17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 TRIP13Q15645 432 aaPredicted RBP17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 SKIDA1Q1XH10 827 aa17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 IL27RAQ6UWB1 636 aa17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 GLIS1Q8NBF1 620 aa17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 BLOC1S5Q8TDH9 187 aa17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 NUS1Q96E22 293 aa17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 COQ10AQ96MF6 247 aa17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 RANBP9Q96S59 729 aa17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 HINFPQ9BQA5 517 aa17.51■□□□□ 0.39
CLSTN3-210ENST00000540931 CASS4Q9NQ75 786 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms