RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 KLHDC7BQ96G42 594 aa15.51■□□□□ 0.07
DDB1-218ENST00000540784 KLF6Q99612 283 aaPredicted RBP15.51■□□□□ 0.07
DDB1-218ENST00000540784 TUBB2BQ9BVA1 445 aa15.51■□□□□ 0.07
DDB1-218ENST00000540784 NUSAP1Q9BXS6 441 aaKnown RBP15.51■□□□□ 0.07
DDB1-218ENST00000540784 TRABDQ9H4I3 376 aa15.51■□□□□ 0.07
DDB1-218ENST00000540784 ARNT2Q9HBZ2 717 aa15.51■□□□□ 0.07
DDB1-218ENST00000540784 SEMA4GQ9NTN9 838 aa15.51■□□□□ 0.07
DDB1-218ENST00000540784 HACD3Q9P035 362 aa15.51■□□□□ 0.07
DDB1-218ENST00000540784 PCYOX1Q9UHG3 505 aa15.51■□□□□ 0.07
DDB1-218ENST00000540784 SHOC2Q9UQ13 582 aa15.51■□□□□ 0.07
DDB1-218ENST00000540784 SDK1Q7Z5N4 2213 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 PATE3B3GLJ2 98 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 VILLO15195 856 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 MAGEC1O60732 1142 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 APRTP07741 180 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 ETV3P41162 512 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 VPS41P49754 854 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 STC1P52823 247 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 C21orf59P57076 290 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 CLDN2P57739 230 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 IRX4P78413 519 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 BASP1P80723 227 aaKnown RBP15.5■□□□□ 0.07
DDB1-218ENST00000540784 OLIG2Q13516 323 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 WSCD2Q2TBF2 565 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 Q6ZVL8 140 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 LYSMD3Q7Z3D4 306 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 TMC3Q7Z5M5 1100 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 TECPR1Q7Z6L1 1165 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 IQCHQ86VS3 1027 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 RAVER1Q8IY67 606 aaKnown RBP15.5■□□□□ 0.07
DDB1-218ENST00000540784 NRSN1Q8IZ57 195 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 TP53I13Q8NBR0 393 aaPredicted RBP15.5■□□□□ 0.07
DDB1-218ENST00000540784 TMEM145Q8NBT3 493 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 DENND6BQ8NEG7 585 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 SPATA4Q8NEY3 305 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 BLOC1S5Q8TDH9 187 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 BMFQ96LC9 184 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 SMOC1Q9H4F8 434 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 MBNL1Q9NR56 388 aaKnown RBP15.5■□□□□ 0.07
DDB1-218ENST00000540784 CA5BQ9Y2D0 317 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 NEU2Q9Y3R4 380 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 ZNF711Q9Y462 761 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 SPO11Q9Y5K1 396 aa15.5■□□□□ 0.07
DDB1-218ENST00000540784 ANKRD36A6QL64 1941 aa15.49■□□□□ 0.07
DDB1-218ENST00000540784 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.49■□□□□ 0.07
DDB1-218ENST00000540784 A0A1W2PR77 199 aa15.49■□□□□ 0.07
DDB1-218ENST00000540784 RGSL1A5PLK6 1076 aa15.49■□□□□ 0.07
DDB1-218ENST00000540784 TLR4O00206 839 aa15.49■□□□□ 0.07
DDB1-218ENST00000540784 FOXD2O60548 495 aaPredicted RBP15.49■□□□□ 0.07
DDB1-218ENST00000540784 SUN1O94901 812 aa15.49■□□□□ 0.07
DDB1-218ENST00000540784 SYPP08247 313 aa15.49■□□□□ 0.07
DDB1-218ENST00000540784 GM2AP17900 193 aa15.49■□□□□ 0.07
DDB1-218ENST00000540784 ADCY8P40145 1251 aa15.49■□□□□ 0.07
DDB1-218ENST00000540784 PTGIRP43119 386 aa15.49■□□□□ 0.07
DDB1-218ENST00000540784 CKAP4Q07065 602 aaKnown RBP15.49■□□□□ 0.07
DDB1-218ENST00000540784 OVGP1Q12889 678 aa15.49■□□□□ 0.07
DDB1-218ENST00000540784 KCTD19Q17RG1 926 aaPredicted RBP15.49■□□□□ 0.07
DDB1-218ENST00000540784 DENND5AQ6IQ26 1287 aa15.49■□□□□ 0.07
DDB1-218ENST00000540784 PPP1R21Q6ZMI0 780 aa15.49■□□□□ 0.07
DDB1-218ENST00000540784 Q6ZSR6 202 aa15.49■□□□□ 0.07
DDB1-218ENST00000540784 SYDE1Q6ZW31 735 aaPredicted RBP15.49■□□□□ 0.07
DDB1-218ENST00000540784 DNAAF3Q8N9W5 541 aa15.49■□□□□ 0.07
DDB1-218ENST00000540784 BRSK1Q8TDC3 778 aa15.49■□□□□ 0.07
DDB1-218ENST00000540784 SLCO2A1Q92959 643 aa15.49■□□□□ 0.07
DDB1-218ENST00000540784 NUS1Q96E22 293 aa15.49■□□□□ 0.07
DDB1-218ENST00000540784 DTD2Q96FN9 168 aa15.49■□□□□ 0.07
DDB1-218ENST00000540784 KRT12Q99456 494 aa15.49■□□□□ 0.07
DDB1-218ENST00000540784 CAPN10Q9HC96 672 aa15.49■□□□□ 0.07
DDB1-218ENST00000540784 PKD2L2Q9NZM6 624 aa15.49■□□□□ 0.07
DDB1-218ENST00000540784 ANKRD6Q9Y2G4 727 aa15.49■□□□□ 0.07
DDB1-218ENST00000540784 CEP192Q8TEP8 1941 aa15.49■□□□□ 0.07
DDB1-218ENST00000540784 A0A1B0GVT2 93 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 POM121BA6NF01 834 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 A6NNZ2 444 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 AURKAO14965 403 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 WNT1P04628 370 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 C1SP09871 688 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 TPH1P17752 444 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 TGM1P22735 817 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 SPINT3P49223 89 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 TERF1P54274 439 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 DR1Q01658 176 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 INPP5AQ14642 412 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 IRF4Q15306 451 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 SF3A2Q15428 464 aaKnown RBP15.48■□□□□ 0.07
DDB1-218ENST00000540784 WHAMMP3Q1A5X7 153 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 PNCKQ6P2M8 343 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 GCNT7Q6ZNI0 430 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 RFLNAQ6ZTI6 216 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 ABI3BPQ7Z7G0 1075 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 NLRP8Q86W28 1048 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 DCP2Q8IU60 420 aaKnown RBP15.48■□□□□ 0.07
DDB1-218ENST00000540784 AP2M1Q96CW1 435 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 ZDHHC5Q9C0B5 715 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 ABCG8Q9H221 673 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 FAM83DQ9H4H8 585 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 PARD6AQ9NPB6 346 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 RAD18Q9NS91 495 aa15.48■□□□□ 0.07
DDB1-218ENST00000540784 SPAG17Q6Q759 2223 aa15.47■□□□□ 0.07
DDB1-218ENST00000540784 C2orf81A6NN90 581 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms