RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 PCDHB12Q9Y5F1 795 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 GMPPBQ9Y5P6 360 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 ALG6Q9Y672 507 aa12.65□□□□□ -0.38
DDX55-206ENST00000539934 TRIP11Q15643 1979 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 SMIM35A0A1B0GVV1 85 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 ZSCAN5CA6NGD5 496 aaPredicted RBP12.64□□□□□ -0.39
DDX55-206ENST00000539934 ACOD1A6NK06 481 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 PGRMC1O00264 195 aaKnown RBP12.64□□□□□ -0.39
DDX55-206ENST00000539934 SNX3O60493 162 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 PHF2O75151 1096 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 SUN1O94901 812 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 STAU1O95793 577 aaKnown RBP12.64□□□□□ -0.39
DDX55-206ENST00000539934 APEHP13798 732 aaKnown RBP12.64□□□□□ -0.39
DDX55-206ENST00000539934 RAP1GDS1P52306 607 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 UBE2IP63279 158 aaKnown RBP12.64□□□□□ -0.39
DDX55-206ENST00000539934 ZNF200P98182 395 aaPredicted RBP12.64□□□□□ -0.39
DDX55-206ENST00000539934 KCNAB2Q13303 367 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 BFSP2Q13515 415 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 TCTE1Q5JU00 501 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 JADE1Q6IE81 842 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 AAGABQ6PD74 315 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 TRIM72Q6ZMU5 477 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 ASPGQ86U10 573 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 ZFP28Q8NHY6 868 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 ACTRT1Q8TDG2 376 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 CPA5Q8WXQ8 436 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 HDAC2Q92769 488 aaKnown RBP12.64□□□□□ -0.39
DDX55-206ENST00000539934 WNT8BQ93098 351 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 OSMRQ99650 979 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 ZSCAN5AQ9BUG6 496 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 ASB7Q9H672 318 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 NXF1Q9UBU9 619 aaKnown RBP12.64□□□□□ -0.39
DDX55-206ENST00000539934 GIMAP2Q9UG22 337 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 USP15Q9Y4E8 981 aaPredicted RBP12.64□□□□□ -0.39
DDX55-206ENST00000539934 PIAS3Q9Y6X2 628 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 TANC1Q9C0D5 1861 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 CACNA1HO95180 2353 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 NOS1APO75052 506 aaPredicted RBP12.64□□□□□ -0.39
DDX55-206ENST00000539934 ANPEPP15144 967 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 RFC2P35250 354 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 BMPR1AP36894 532 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 GP5P40197 560 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 ARL1P40616 181 aaPredicted RBP12.64□□□□□ -0.39
DDX55-206ENST00000539934 C21orf59P57076 290 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 TNNC1P63316 161 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 CCINQ13939 588 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 FAM76BQ5HYJ3 339 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 ZNF667Q5HYK9 610 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 RBM20Q5T481 1227 aaKnown RBP12.64□□□□□ -0.39
DDX55-206ENST00000539934 SEZ6L2Q6UXD5 910 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 LRRC8DQ7L1W4 858 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 TAB3Q8N5C8 712 aaPredicted RBP12.64□□□□□ -0.39
DDX55-206ENST00000539934 TAMM41Q96BW9 452 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 RAD9AQ99638 391 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 TRIM62Q9BVG3 475 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 TDRD1Q9BXT4 1180 aaKnown RBP12.64□□□□□ -0.39
DDX55-206ENST00000539934 ZCCHC2Q9C0B9 1178 aaKnown RBP12.64□□□□□ -0.39
DDX55-206ENST00000539934 CISHQ9NSE2 258 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 GIMAP4Q9NUV9 329 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 FETUBQ9UGM5 382 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 NOC2LQ9Y3T9 749 aaKnown RBP12.64□□□□□ -0.39
DDX55-206ENST00000539934 IPPQ9Y573 584 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 DMRT1Q9Y5R6 373 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 PCM1Q15154 2024 aa12.64□□□□□ -0.39
DDX55-206ENST00000539934 TECTAO75443 2155 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 MBLAC1A4D2B0 266 aaPredicted RBP12.63□□□□□ -0.39
DDX55-206ENST00000539934 KCNN4O15554 427 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 TSPAN6O43657 245 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 S100A9P06702 114 aaKnown RBP12.63□□□□□ -0.39
DDX55-206ENST00000539934 SMIM18P0DKX4 95 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 TIMP2P16035 220 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 HTR2BP41595 481 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 YWHAEP62258 255 aaKnown RBP12.63□□□□□ -0.39
DDX55-206ENST00000539934 FOLH1Q04609 750 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 DCAF4L1Q3SXM0 396 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 TNFAIP8L3Q5GJ75 292 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 MCOLN2Q8IZK6 566 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 CLYBLQ8N0X4 340 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 LIX1Q8N485 282 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 UBR7Q8N806 425 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 C1orf127Q8N9H9 656 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 ASCC1Q8N9N2 400 aaKnown RBP12.63□□□□□ -0.39
DDX55-206ENST00000539934 SIMC1Q8NDZ2 872 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 CATSPER1Q8NEC5 780 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 UTP15Q8TED0 518 aaKnown RBP12.63□□□□□ -0.39
DDX55-206ENST00000539934 DNAJB3Q8WWF6 145 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 TMIGD2Q96BF3 282 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 SEC22CQ9BRL7 303 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 EMILIN2Q9BXX0 1053 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 XYLT2Q9H1B5 865 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 ADAMTS10Q9H324 1103 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 NFU1Q9UMS0 254 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 CSNK1G3Q9Y6M4 447 aa12.63□□□□□ -0.39
DDX55-206ENST00000539934 RIF1Q5UIP0 2472 aaKnown RBP12.63□□□□□ -0.39
DDX55-206ENST00000539934 LOC390937A0A1W2PQ73 354 aa12.62□□□□□ -0.39
DDX55-206ENST00000539934 HAS3O00219 553 aa12.62□□□□□ -0.39
DDX55-206ENST00000539934 DDX3YO15523 660 aaKnown RBP12.62□□□□□ -0.39
DDX55-206ENST00000539934 DCXO43602 365 aa12.62□□□□□ -0.39
DDX55-206ENST00000539934 RBBP9O75884 186 aa12.62□□□□□ -0.39
DDX55-206ENST00000539934 TFAP2AP05549 437 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms