RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 ELMSAN1Q6PJG2 1045 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 TBC1D1Q86TI0 1168 aaPredicted RBP22.45■■□□□ 1.18
HOMER3-204ENST00000539827 LCA5Q86VQ0 697 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 OR2AP1Q8NGE2 309 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 TTC8Q8TAM2 541 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 MYLIPQ8WY64 445 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 ACTR5Q9H9F9 607 aaPredicted RBP22.45■■□□□ 1.18
HOMER3-204ENST00000539827 IGSF5Q9NSI5 407 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 HACD3Q9P035 362 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 SLC25A13Q9UJS0 675 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 MID2Q9UJV3 735 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 MTF2Q9Y483 593 aaPredicted RBP22.45■■□□□ 1.18
HOMER3-204ENST00000539827 ATG2AQ2TAZ0 1938 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 SP100P23497 879 aaPredicted RBP22.45■■□□□ 1.18
HOMER3-204ENST00000539827 ARRB2P32121 409 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 MC4RP32245 332 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 GRIA4P48058 902 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 ACTN3Q08043 901 aaPredicted RBP22.45■■□□□ 1.18
HOMER3-204ENST00000539827 SETDB1Q15047 1291 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 DUSP6Q16828 381 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 FAM45BPQ6NSW5 357 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 C22orf39Q6P5X5 142 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 ZYG11AQ6WRX3 759 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 NAPRTQ6XQN6 538 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 LYSMD3Q7Z3D4 306 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 CCDC91Q7Z6B0 441 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 METTL3Q86U44 580 aaKnown RBP22.45■■□□□ 1.18
HOMER3-204ENST00000539827 VN1R2Q8NFZ6 395 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 FAM45AQ8TCE6 357 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 GPR63Q9BZJ6 419 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 GPAMQ9HCL2 828 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 XPR1Q9UBH6 696 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 DNAJC16Q9Y2G8 782 aa22.45■■□□□ 1.18
HOMER3-204ENST00000539827 HTRA2O43464 458 aaPredicted RBP22.44■■□□□ 1.18
HOMER3-204ENST00000539827 DCTN3O75935 186 aa22.44■■□□□ 1.18
HOMER3-204ENST00000539827 TCF3P15923 654 aa22.44■■□□□ 1.18
HOMER3-204ENST00000539827 GRK2P25098 689 aa22.44■■□□□ 1.18
HOMER3-204ENST00000539827 STC1P52823 247 aa22.44■■□□□ 1.18
HOMER3-204ENST00000539827 ABCE1P61221 599 aaKnown RBP22.44■■□□□ 1.18
HOMER3-204ENST00000539827 TYSND1Q2T9J0 566 aa22.44■■□□□ 1.18
HOMER3-204ENST00000539827 PIM3Q86V86 326 aa22.44■■□□□ 1.18
HOMER3-204ENST00000539827 ERP27Q96DN0 273 aa22.44■■□□□ 1.18
HOMER3-204ENST00000539827 RSPRY1Q96DX4 576 aa22.44■■□□□ 1.18
HOMER3-204ENST00000539827 PBX4Q9BYU1 374 aa22.44■■□□□ 1.18
HOMER3-204ENST00000539827 RASSF4Q9H2L5 321 aa22.44■■□□□ 1.18
HOMER3-204ENST00000539827 ATP13A3Q9H7F0 1226 aa22.44■■□□□ 1.18
HOMER3-204ENST00000539827 ACSS2Q9NR19 701 aa22.44■■□□□ 1.18
HOMER3-204ENST00000539827 SLCO3A1Q9UIG8 710 aa22.44■■□□□ 1.18
HOMER3-204ENST00000539827 ZMYM5Q9UJ78 669 aa22.44■■□□□ 1.18
HOMER3-204ENST00000539827 HS3ST2Q9Y278 367 aa22.44■■□□□ 1.18
HOMER3-204ENST00000539827 TRIM13O60858 407 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 MAGEA9P43362 315 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 MAPK8P45983 427 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 SNRPD1P62314 119 aaKnown RBP22.43■■□□□ 1.18
HOMER3-204ENST00000539827 CCDC15Q0P6D6 951 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 TSNAXIP1Q2TAA8 658 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 ZRANB3Q5FWF4 1079 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 TMEM207Q6UWW9 146 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 OR6Y1Q8NGX8 325 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 RDH11Q8TC12 318 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 ANKRD49Q8WVL7 239 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 MOCOSQ96EN8 888 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 SGF29Q96ES7 293 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 LRRC37BQ96QE4 947 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 SORT1Q99523 831 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 APOL5Q9BWW9 433 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 MAGEE1Q9HCI5 957 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 OXSMQ9NWU1 459 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.43■■□□□ 1.18
HOMER3-204ENST00000539827 HEY2Q9UBP5 337 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 SLC12A4Q9UP95 1085 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 UBA6A0AVT1 1052 aaPredicted RBP22.43■■□□□ 1.18
HOMER3-204ENST00000539827 CCDC166P0CW27 439 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 VIPR2P41587 438 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 PEX6Q13608 980 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 MYLK3Q32MK0 819 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 PSAPL1Q6NUJ1 521 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 CELF5Q8N6W0 485 aaKnown RBP22.43■■□□□ 1.18
HOMER3-204ENST00000539827 EID2BQ96D98 161 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 GATA5Q9BWX5 397 aaPredicted RBP22.43■■□□□ 1.18
HOMER3-204ENST00000539827 CAPN7Q9Y6W3 813 aa22.43■■□□□ 1.18
HOMER3-204ENST00000539827 CHD7Q9P2D1 2997 aa22.42■■□□□ 1.18
HOMER3-204ENST00000539827 TARM1B6A8C7 271 aa22.42■■□□□ 1.18
HOMER3-204ENST00000539827 NDUFS3O75489 264 aa22.42■■□□□ 1.18
HOMER3-204ENST00000539827 FDXRP22570 491 aa22.42■■□□□ 1.18
HOMER3-204ENST00000539827 WEE1P30291 646 aa22.42■■□□□ 1.18
HOMER3-204ENST00000539827 FMO4P31512 558 aa22.42■■□□□ 1.18
HOMER3-204ENST00000539827 ECT2LQ008S8 904 aa22.42■■□□□ 1.18
HOMER3-204ENST00000539827 TIAL1Q01085 375 aaKnown RBP eCLIP22.42■■□□□ 1.18
HOMER3-204ENST00000539827 BNIP1Q12981 228 aa22.42■■□□□ 1.18
HOMER3-204ENST00000539827 TRIM68Q6AZZ1 485 aa22.42■■□□□ 1.18
HOMER3-204ENST00000539827 MTDHQ86UE4 582 aaKnown RBP22.42■■□□□ 1.18
HOMER3-204ENST00000539827 ADIPOR2Q86V24 386 aa22.42■■□□□ 1.18
HOMER3-204ENST00000539827 ZSWIM9Q86XI8 627 aa22.42■■□□□ 1.18
HOMER3-204ENST00000539827 ST13P5Q8NFI4 369 aaPredicted RBP22.42■■□□□ 1.18
HOMER3-204ENST00000539827 SREK1Q8WXA9 508 aaKnown RBP22.42■■□□□ 1.18
HOMER3-204ENST00000539827 OTUB2Q96DC9 234 aa22.42■■□□□ 1.18
HOMER3-204ENST00000539827 AARSD1Q9BTE6 412 aaKnown RBP22.42■■□□□ 1.18
HOMER3-204ENST00000539827 IGFLR1Q9H665 355 aa22.42■■□□□ 1.18
HOMER3-204ENST00000539827 INTS10Q9NVR2 710 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms