RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 TNFRSF10CO14798 259 aa16.78■□□□□ 0.28
DDB1-215ENST00000539712 BRINP1O60477 761 aa16.78■□□□□ 0.28
DDB1-215ENST00000539712 CSO75390 466 aaKnown RBP16.78■□□□□ 0.28
DDB1-215ENST00000539712 ALPIP09923 528 aa16.78■□□□□ 0.28
DDB1-215ENST00000539712 CCNB1P14635 433 aa16.78■□□□□ 0.28
DDB1-215ENST00000539712 CTPS1P17812 591 aa16.78■□□□□ 0.28
DDB1-215ENST00000539712 ARHGAP25P42331 645 aa16.78■□□□□ 0.28
DDB1-215ENST00000539712 ISXQ2M1V0 245 aa16.78■□□□□ 0.28
DDB1-215ENST00000539712 FAM182AQ5T1J6 154 aa16.78■□□□□ 0.28
DDB1-215ENST00000539712 ARMC12Q5T9G4 340 aa16.78■□□□□ 0.28
DDB1-215ENST00000539712 CRTC1Q6UUV9 634 aa16.78■□□□□ 0.28
DDB1-215ENST00000539712 SFTPA2Q8IWL1 248 aa16.78■□□□□ 0.28
DDB1-215ENST00000539712 SDR16C5Q8N3Y7 309 aa16.78■□□□□ 0.28
DDB1-215ENST00000539712 PAF1Q8N7H5 531 aa16.78■□□□□ 0.28
DDB1-215ENST00000539712 KYQ8NBH2 561 aa16.78■□□□□ 0.28
DDB1-215ENST00000539712 TEX101Q9BY14 249 aa16.78■□□□□ 0.28
DDB1-215ENST00000539712 POLR1EQ9GZS1 481 aaKnown RBP16.78■□□□□ 0.28
DDB1-215ENST00000539712 EVA1BQ9NVM1 165 aa16.78■□□□□ 0.28
DDB1-215ENST00000539712 RBM22Q9NW64 420 aaKnown RBP eCLIP16.78■□□□□ 0.284e-7■■■■■ 38
DDB1-215ENST00000539712 RABGEF1Q9UJ41 708 aa16.78■□□□□ 0.28
DDB1-215ENST00000539712 PADI4Q9UM07 663 aa16.78■□□□□ 0.28
DDB1-215ENST00000539712 ZNF487B1APH4 448 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 CACNB4O00305 520 aaPredicted RBP16.77■□□□□ 0.28
DDB1-215ENST00000539712 KALRNO60229 2985 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 TNFP01375 233 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 HLA-DQB2P05538 268 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 MMP2P08253 660 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 CTSEP14091 401 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 EIF2S3P41091 472 aaKnown RBP16.77■□□□□ 0.28
DDB1-215ENST00000539712 PTSQ03393 145 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 SLC9A4Q6AI14 798 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 TIGD7Q6NT04 549 aaPredicted RBP16.77■□□□□ 0.28
DDB1-215ENST00000539712 SARM1Q6SZW1 724 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 CNTD1Q8N815 330 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 ARL10Q8N8L6 244 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 TC2NQ8N9U0 490 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 ATL2Q8NHH9 583 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 CCL4L1Q8NHW4 92 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 TPCN2Q8NHX9 752 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 PTCD2Q8WV60 388 aaKnown RBP16.77■□□□□ 0.28
DDB1-215ENST00000539712 HDAC11Q96DB2 347 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 NUS1Q96E22 293 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 DEPDC7Q96QD5 511 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 LGMNQ99538 433 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 TMEM168Q9H0V1 697 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 ABCG4Q9H172 646 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 WDR26Q9H7D7 661 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 AMACRQ9UHK6 382 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 PTPRQQ9UMZ3 2332 aa16.77■□□□□ 0.28
DDB1-215ENST00000539712 A0A0J9YYE9 177 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 LRRD1A4D1F6 860 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 AKR1B15C9JRZ8 316 aaPredicted RBP16.76■□□□□ 0.27
DDB1-215ENST00000539712 PSMD11O00231 422 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 USP12O75317 370 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 SOD1P00441 154 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 TRBC1P01850 177 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 MPOP05164 745 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 CEACAM5P06731 702 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 CYP2A6P11509 494 aaPredicted RBP16.76■□□□□ 0.27
DDB1-215ENST00000539712 CES1P23141 567 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 RPIAP49247 311 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 PDX1P52945 283 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 PPIDQ08752 370 aaKnown RBP16.76■□□□□ 0.27
DDB1-215ENST00000539712 ITKQ08881 620 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 TSR1Q2NL82 804 aaKnown RBP16.76■□□□□ 0.27
DDB1-215ENST00000539712 LRRC38Q5VT99 294 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 DENND2CQ68D51 928 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 OGFOD3Q6PK18 319 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 RHOT2Q8IXI1 618 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.76■□□□□ 0.27
DDB1-215ENST00000539712 GPR156Q8NFN8 814 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 SNIP1Q8TAD8 396 aaKnown RBP16.76■□□□□ 0.27
DDB1-215ENST00000539712 GLMNQ92990 594 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 NAT6Q93015 286 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 CRELD1Q96HD1 420 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 CCDC3Q9BQI4 270 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 TDRD1Q9BXT4 1180 aaKnown RBP16.76■□□□□ 0.27
DDB1-215ENST00000539712 FRMD8Q9BZ67 464 aaPredicted RBP16.76■□□□□ 0.27
DDB1-215ENST00000539712 SIRPGQ9P1W8 387 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 GULP1Q9UBP9 304 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 INTUQ9ULD6 942 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 GPR34Q9UPC5 381 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 CHKBQ9Y259 395 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 HYOU1Q9Y4L1 999 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 ST14Q9Y5Y6 855 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 ATMQ13315 3056 aa16.76■□□□□ 0.27
DDB1-215ENST00000539712 ARHGEF17Q96PE2 2063 aaPredicted RBP16.75■□□□□ 0.27
DDB1-215ENST00000539712 KCNK1O00180 336 aa16.75■□□□□ 0.27
DDB1-215ENST00000539712 NTN3O00634 580 aaPredicted RBP16.75■□□□□ 0.27
DDB1-215ENST00000539712 JCHAINP01591 159 aa16.75■□□□□ 0.27
DDB1-215ENST00000539712 TPM1P09493 284 aa16.75■□□□□ 0.27
DDB1-215ENST00000539712 MYCLP1P12525 358 aaPredicted RBP16.75■□□□□ 0.27
DDB1-215ENST00000539712 MX2P20592 715 aa16.75■□□□□ 0.27
DDB1-215ENST00000539712 KELP23276 732 aa16.75■□□□□ 0.27
DDB1-215ENST00000539712 ITPKBP27987 946 aa16.75■□□□□ 0.27
DDB1-215ENST00000539712 TEAD1P28347 426 aa16.75■□□□□ 0.27
DDB1-215ENST00000539712 DPTQ07507 201 aa16.75■□□□□ 0.27
DDB1-215ENST00000539712 ZBTB17Q13105 803 aa16.75■□□□□ 0.27
DDB1-215ENST00000539712 TBC1D25Q3MII6 688 aa16.75■□□□□ 0.27
DDB1-215ENST00000539712 LRRC66Q68CR7 880 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms