RNA–Protein interactions for RNA: ENST00000539680.1

ECHDC2-222, Transcript of enoyl-CoA hydratase domain containing 2, human

Gene ECHDC2, Length 5,817 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-222	ENST00000539680	PTF1A	Q7RTS3	328 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	APTX	Q7Z2E3	356 aa	Known RBP	9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	TBC1D21	Q8IYX1	336 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	LNX1	Q8TBB1	728 aa	Predicted RBP	9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	C2orf15	Q8WU43	125 aa	Known RBP	9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	COL26A1	Q96A83	441 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	BTBD9	Q96Q07	612 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	PANX1	Q96RD7	426 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	SEMA3C	Q99985	751 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	CDADC1	Q9BWV3	514 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	CRISPLD1	Q9H336	500 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	TOR4A	Q9NXH8	423 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	RAPGEFL1	Q9UHV5	662 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	PPIE	Q9UNP9	301 aa	Known RBP	9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	HEBP2	Q9Y5Z4	205 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	AK9	Q5TCS8	1911 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680		A0A087X0B3	334 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	ISM1	B1AKI9	464 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	STX16-NPEPL1	H3BU86	382 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	STX16	O14662	325 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	CBX6	O95503	412 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	CXCR3	P49682	368 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	PKNOX1	P55347	436 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	ATP13A5	Q4VNC0	1218 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	LCN1P1	Q5VSP4	162 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	UBE2R2	Q712K3	238 aa	Predicted RBP	9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	PDPR	Q8NCN5	879 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	COPS8	Q99627	209 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	CNPPD1	Q9BV87	410 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	RNF208	Q9H0X6	261 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	CDT1	Q9H211	546 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	ACSS3	Q9H6R3	686 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	CLK4	Q9HAZ1	481 aa	Known RBP	9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	SNX15	Q9NRS6	342 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	PHPT1	Q9NRX4	125 aa	Predicted RBP	9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	MOXD2P	A6NHM9	499 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	PEX11A	O75192	247 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	CSDE1	O75534	798 aa	Known RBP	9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	CAPN15	O75808	1086 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	PTX3	P26022	381 aa	Predicted RBP	9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	BEX3	Q00994	111 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	LPIN1	Q14693	890 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	MAPK11	Q15759	364 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	CPTP	Q5TA50	214 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	CCDC80	Q76M96	950 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	SPPL2B	Q8TCT7	592 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	ZNF483	Q8TF39	744 aa	Predicted RBP	9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	AP2M1	Q96CW1	435 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	MCRS1	Q96EZ8	462 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	COX4I2	Q96KJ9	171 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	BTN2A3P	Q96KV6	586 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	DCUN1D5	Q9BTE7	237 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	SGK2	Q9HBY8	427 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	PIH1D1	Q9NWS0	290 aa	Known RBP	9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	CALML5	Q9NZT1	146 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	DMTF1	Q9Y222	760 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	EFR3B	Q9Y2G0	817 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	MROH2A	A6NES4	1674 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	LYPLA2	O95372	231 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	GLUD1	P00367	558 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	LYN	P07948	512 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	GIMD1	P0DJR0	217 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	ERCC2	P18074	760 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	HOXA10	P31260	410 aa	Predicted RBP	9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	PLK1	P53350	603 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	ABR	Q12979	859 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	AUH	Q13825	339 aa	Known RBP	9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	TAF5	Q15542	800 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	PTPRN	Q16849	979 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	ATP13A4	Q4VNC1	1196 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	FAM35A	Q86V20	835 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	C17orf64	Q86WR6	236 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	KCTD4	Q8WVF5	259 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	PRCC	Q92733	491 aa	Predicted RBP	9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	OR52E6	Q96RD3	313 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	GRIP2	Q9C0E4	1043 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	ATRN	O75882	1429 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	FAM237B	A0A1B0GVD1	139 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	DHRS12	A0PJE2	317 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	DDN	O94850	711 aa	Predicted RBP	9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	PTPN9	P43378	593 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	IDH2	P48735	452 aa	Known RBP	9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	NOMO3	P69849	1222 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	DLG4	P78352	724 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	CNTN2	Q02246	1040 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	CAPS	Q13938	189 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	CAMK1	Q14012	370 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	C9orf57	Q5W0N0	161 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	C16orf46	Q6P387	395 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	VSTM1	Q6UX27	236 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	PIGZ	Q86VD9	579 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	HIPK1	Q86Z02	1210 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	ZNF563	Q8TA94	476 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	PYDC1	Q8WXC3	89 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	ZHX1-C8orf76	Q96EF9	292 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	PCBD2	Q9H0N5	130 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	DHX33	Q9H6R0	707 aa	Known RBP	9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	TMEM27	Q9HBJ8	222 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	PTPRH	Q9HD43	1115 aa		9	□□□□□ -0.97
ECHDC2-222	ENST00000539680	BPIFA1	Q9NP55	256 aa		9	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms