RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 TAS2R40P59535 323 aa22.22■■□□□ 1.15
SCARB1-206ENST00000539320 CCDC173Q0VFZ6 552 aa22.22■■□□□ 1.15
SCARB1-206ENST00000539320 ARHGEF7Q14155 803 aa22.22■■□□□ 1.15
SCARB1-206ENST00000539320 SKOR2Q2VWA4 1001 aaPredicted RBP22.22■■□□□ 1.15
SCARB1-206ENST00000539320 C3orf38Q5JPI3 329 aa22.22■■□□□ 1.15
SCARB1-206ENST00000539320 TIGD7Q6NT04 549 aaPredicted RBP22.22■■□□□ 1.15
SCARB1-206ENST00000539320 KCTD6Q8NC69 237 aa22.22■■□□□ 1.15
SCARB1-206ENST00000539320 OR8K1Q8NGG5 319 aa22.22■■□□□ 1.15
SCARB1-206ENST00000539320 MAML1Q92585 1016 aa22.22■■□□□ 1.15
SCARB1-206ENST00000539320 FAF2Q96CS3 445 aa22.22■■□□□ 1.15
SCARB1-206ENST00000539320 LGR4Q9BXB1 951 aa22.22■■□□□ 1.15
SCARB1-206ENST00000539320 PHPT1Q9NRX4 125 aaPredicted RBP22.22■■□□□ 1.15
SCARB1-206ENST00000539320 SATB2Q9UPW6 733 aa22.22■■□□□ 1.15
SCARB1-206ENST00000539320 RAI2Q9Y5P3 530 aa22.22■■□□□ 1.15
SCARB1-206ENST00000539320 FASNP49327 2511 aaKnown RBP22.22■■□□□ 1.15
SCARB1-206ENST00000539320 IGSF10Q6WRI0 2623 aa22.22■■□□□ 1.15
SCARB1-206ENST00000539320 KIF26BQ2KJY2 2108 aa22.21■■□□□ 1.15
SCARB1-206ENST00000539320 MAP3K6O95382 1288 aa22.21■■□□□ 1.15
SCARB1-206ENST00000539320 ETV3P41162 512 aa22.21■■□□□ 1.15
SCARB1-206ENST00000539320 PDX1P52945 283 aa22.21■■□□□ 1.15
SCARB1-206ENST00000539320 ERVPABLB-1P60509 514 aa22.21■■□□□ 1.15
SCARB1-206ENST00000539320 ITKQ08881 620 aa22.21■■□□□ 1.15
SCARB1-206ENST00000539320 IFI16Q16666 785 aaKnown RBP22.21■■□□□ 1.15
SCARB1-206ENST00000539320 ASTE1Q2TB18 679 aaPredicted RBP22.21■■□□□ 1.15
SCARB1-206ENST00000539320 ANKRD20A8PQ5CZ79 823 aa22.21■■□□□ 1.15
SCARB1-206ENST00000539320 ALG1LQ6GMV1 187 aa22.21■■□□□ 1.15
SCARB1-206ENST00000539320 HSD11B1LQ7Z5J1 315 aa22.21■■□□□ 1.15
SCARB1-206ENST00000539320 TAF8Q7Z7C8 310 aa22.21■■□□□ 1.15
SCARB1-206ENST00000539320 HEATR4Q86WZ0 1026 aa22.21■■□□□ 1.15
SCARB1-206ENST00000539320 MAP7D3Q8IWC1 876 aa22.21■■□□□ 1.15
SCARB1-206ENST00000539320 ZNF248Q8NDW4 579 aa22.21■■□□□ 1.15
SCARB1-206ENST00000539320 OR6C4Q8NGE1 309 aa22.21■■□□□ 1.15
SCARB1-206ENST00000539320 SCRN2Q96FV2 425 aa22.21■■□□□ 1.15
SCARB1-206ENST00000539320 LGMNQ99538 433 aa22.21■■□□□ 1.15
SCARB1-206ENST00000539320 CYP4F12Q9HCS2 524 aa22.21■■□□□ 1.15
SCARB1-206ENST00000539320 ASCL3Q9NQ33 180 aa22.21■■□□□ 1.15
SCARB1-206ENST00000539320 ZNHIT6Q9NWK9 470 aaKnown RBP22.21■■□□□ 1.15
SCARB1-206ENST00000539320 MOSPD1Q9UJG1 213 aa22.21■■□□□ 1.15
SCARB1-206ENST00000539320 PRSS38A1L453 326 aa22.2■■□□□ 1.14
SCARB1-206ENST00000539320 NTN3O00634 580 aaPredicted RBP22.2■■□□□ 1.14
SCARB1-206ENST00000539320 CASC3O15234 703 aaKnown RBP22.2■■□□□ 1.14
SCARB1-206ENST00000539320 TMEM253P0C7T8 217 aa22.2■■□□□ 1.14
SCARB1-206ENST00000539320 KRT10P13645 584 aa22.2■■□□□ 1.14
SCARB1-206ENST00000539320 CTPS1P17812 591 aa22.2■■□□□ 1.14
SCARB1-206ENST00000539320 TSR1Q2NL82 804 aaKnown RBP22.2■■□□□ 1.14
SCARB1-206ENST00000539320 SOWAHCQ53LP3 525 aaPredicted RBP22.2■■□□□ 1.14
SCARB1-206ENST00000539320 ZFYVE27Q5T4F4 411 aa22.2■■□□□ 1.14
SCARB1-206ENST00000539320 IGF2-ASQ6U949 168 aa22.2■■□□□ 1.14
SCARB1-206ENST00000539320 TSPAN33Q86UF1 283 aa22.2■■□□□ 1.14
SCARB1-206ENST00000539320 SPACA3Q8IXA5 215 aa22.2■■□□□ 1.14
SCARB1-206ENST00000539320 GPR156Q8NFN8 814 aa22.2■■□□□ 1.14
SCARB1-206ENST00000539320 PIH1D2Q8WWB5 315 aa22.2■■□□□ 1.14
SCARB1-206ENST00000539320 FATE1Q969F0 183 aa22.2■■□□□ 1.14
SCARB1-206ENST00000539320 HIC2Q96JB3 615 aa22.2■■□□□ 1.14
SCARB1-206ENST00000539320 TMEM168Q9H0V1 697 aa22.2■■□□□ 1.14
SCARB1-206ENST00000539320 THSD1Q9NS62 852 aa22.2■■□□□ 1.14
SCARB1-206ENST00000539320 HAUS2Q9NVX0 235 aa22.2■■□□□ 1.14
SCARB1-206ENST00000539320 RABGEF1Q9UJ41 708 aa22.2■■□□□ 1.14
SCARB1-206ENST00000539320 PPIL1Q9Y3C6 166 aa22.2■■□□□ 1.14
SCARB1-206ENST00000539320 TTLL3Q9Y4R7 772 aa22.2■■□□□ 1.14
SCARB1-206ENST00000539320 ARHGEF17Q96PE2 2063 aaPredicted RBP22.19■■□□□ 1.14
SCARB1-206ENST00000539320 NBEAQ8NFP9 2946 aa22.19■■□□□ 1.14
SCARB1-206ENST00000539320 A0A1W2PNU3 283 aaPredicted RBP22.19■■□□□ 1.14
SCARB1-206ENST00000539320 MATN3O15232 486 aa22.19■■□□□ 1.14
SCARB1-206ENST00000539320 AKR1B10O60218 316 aa22.19■■□□□ 1.14
SCARB1-206ENST00000539320 FZD6O60353 706 aa22.19■■□□□ 1.14
SCARB1-206ENST00000539320 TPM1P09493 284 aa22.19■■□□□ 1.14
SCARB1-206ENST00000539320 MX2P20592 715 aa22.19■■□□□ 1.14
SCARB1-206ENST00000539320 TEAD1P28347 426 aa22.19■■□□□ 1.14
SCARB1-206ENST00000539320 DSC2Q02487 901 aa22.19■■□□□ 1.14
SCARB1-206ENST00000539320 GBE1Q04446 702 aa22.19■■□□□ 1.14
SCARB1-206ENST00000539320 TLE3Q04726 772 aa22.19■■□□□ 1.14
SCARB1-206ENST00000539320 RAET1GQ6H3X3 334 aa22.19■■□□□ 1.14
SCARB1-206ENST00000539320 VSTM4Q8IW00 320 aa22.19■■□□□ 1.14
SCARB1-206ENST00000539320 NDUFAF2Q8N183 169 aa22.19■■□□□ 1.14
SCARB1-206ENST00000539320 CBARPQ8N350 705 aaPredicted RBP22.19■■□□□ 1.14
SCARB1-206ENST00000539320 PQLC3Q8N755 202 aa22.19■■□□□ 1.14
SCARB1-206ENST00000539320 FAM46DQ8NEK8 389 aa22.19■■□□□ 1.14
SCARB1-206ENST00000539320 TSGA13Q96PP4 275 aa22.19■■□□□ 1.14
SCARB1-206ENST00000539320 TEX101Q9BY14 249 aa22.19■■□□□ 1.14
SCARB1-206ENST00000539320 PRORYQ9H606 182 aa22.19■■□□□ 1.14
SCARB1-206ENST00000539320 CARS2Q9HA77 564 aaKnown RBP22.19■■□□□ 1.14
SCARB1-206ENST00000539320 RBM22Q9NW64 420 aaKnown RBP eCLIP22.19■■□□□ 1.141e-12■■■□□ 18.4
SCARB1-206ENST00000539320 AMACRQ9UHK6 382 aa22.19■■□□□ 1.14
SCARB1-206ENST00000539320 PCDHGA8Q9Y5G5 932 aa22.19■■□□□ 1.14
SCARB1-206ENST00000539320 LOC400499M0QZD8 3231 aa22.19■■□□□ 1.14
SCARB1-206ENST00000539320 GOLGA6CA6NDK9 693 aa22.18■■□□□ 1.14
SCARB1-206ENST00000539320 GOLGA6BA6NDN3 693 aa22.18■■□□□ 1.14
SCARB1-206ENST00000539320 B4DGG1 531 aa22.18■■□□□ 1.14
SCARB1-206ENST00000539320 D6RAR5 112 aa22.18■■□□□ 1.14
SCARB1-206ENST00000539320 MFAP3LO75121 409 aa22.18■■□□□ 1.14
SCARB1-206ENST00000539320 RPLP0P05388 317 aaKnown RBP22.18■■□□□ 1.14
SCARB1-206ENST00000539320 PDHA1P08559 390 aa22.18■■□□□ 1.14
SCARB1-206ENST00000539320 GOLGA6DP0CG33 693 aa22.18■■□□□ 1.14
SCARB1-206ENST00000539320 CCNCP24863 283 aa22.18■■□□□ 1.14
SCARB1-206ENST00000539320 RBMS1P29558 406 aaKnown RBP22.18■■□□□ 1.14
SCARB1-206ENST00000539320 CDK3Q00526 305 aa22.18■■□□□ 1.14
SCARB1-206ENST00000539320 PTPRRQ15256 657 aa22.18■■□□□ 1.14
SCARB1-206ENST00000539320 Q6ZVL8 140 aa22.18■■□□□ 1.14
SCARB1-206ENST00000539320 WDR36Q8NI36 951 aaKnown RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms