RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 LHCGRP22888 699 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 SLC5A2P31639 672 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 HSPA9P38646 679 aaKnown RBP12.53□□□□□ -0.4
VAMP1-206ENST00000538970 KLHL30Q0D2K2 578 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 HLTFQ14527 1009 aaKnown RBP eCLIP12.53□□□□□ -0.4
VAMP1-206ENST00000538970 CNGA3Q16281 694 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 SMTNL2Q2TAL5 461 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 C14orf28Q4W4Y0 310 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 SPECC1LQ69YQ0 1117 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 TMCO3Q6UWJ1 677 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 CCDC81Q6ZN84 652 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 SPRED1Q7Z699 444 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 PGBD5Q8N414 524 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 Q8N9G6 341 aaPredicted RBP12.53□□□□□ -0.4
VAMP1-206ENST00000538970 FAM46DQ8NEK8 389 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 CCL4L1Q8NHW4 92 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 NUS1Q96E22 293 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 TMEM74Q96NL1 305 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 CSPG4P5Q96PW8 444 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 NUDCD1Q96RS6 583 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 MGME1Q9BQP7 344 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 CYP4F12Q9HCS2 524 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 MRPL47Q9HD33 250 aaKnown RBP12.53□□□□□ -0.4
VAMP1-206ENST00000538970 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.53□□□□□ -0.4
VAMP1-206ENST00000538970 ETNK2Q9NVF9 386 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.53□□□□□ -0.4
VAMP1-206ENST00000538970 TMEM63CQ9P1W3 806 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 MYO1AQ9UBC5 1043 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 ACSL6Q9UKU0 697 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 LOXL2Q9Y4K0 774 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 PCDHGC4Q9Y5F7 938 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 RNF215Q9Y6U7 377 aa12.53□□□□□ -0.4
VAMP1-206ENST00000538970 A0A1B0GTH6 734 aa12.52□□□□□ -0.41
VAMP1-206ENST00000538970 PDE2AO00408 941 aaPredicted RBP12.52□□□□□ -0.41
VAMP1-206ENST00000538970 NUDT21O43809 227 aaKnown RBP12.52□□□□□ -0.41
VAMP1-206ENST00000538970 MAFKO60675 156 aa12.52□□□□□ -0.41
VAMP1-206ENST00000538970 HEXIM1O94992 359 aaKnown RBP12.52□□□□□ -0.41
VAMP1-206ENST00000538970 SKILP12757 684 aa12.52□□□□□ -0.41
VAMP1-206ENST00000538970 AMPD1P23109 780 aa12.52□□□□□ -0.41
VAMP1-206ENST00000538970 VIPR1P32241 457 aa12.52□□□□□ -0.41
VAMP1-206ENST00000538970 ARL4AP40617 200 aa12.52□□□□□ -0.41
VAMP1-206ENST00000538970 ZFP36L1Q07352 338 aaKnown RBP12.52□□□□□ -0.41
VAMP1-206ENST00000538970 TRAF2Q12933 501 aa12.52□□□□□ -0.41
VAMP1-206ENST00000538970 TSR1Q2NL82 804 aaKnown RBP12.52□□□□□ -0.41
VAMP1-206ENST00000538970 ZSCAN23Q3MJ62 389 aa12.52□□□□□ -0.41
VAMP1-206ENST00000538970 FILIP1LQ4L180 1135 aa12.52□□□□□ -0.41
VAMP1-206ENST00000538970 KIAA1614Q5VZ46 1190 aa12.52□□□□□ -0.41
VAMP1-206ENST00000538970 POLNQ7Z5Q5 900 aa12.52□□□□□ -0.41
VAMP1-206ENST00000538970 HEATR4Q86WZ0 1026 aa12.52□□□□□ -0.41
VAMP1-206ENST00000538970 PDCD6IPQ8WUM4 868 aaKnown RBP12.52□□□□□ -0.41
VAMP1-206ENST00000538970 HSPH1Q92598 858 aa12.52□□□□□ -0.41
VAMP1-206ENST00000538970 DTD2Q96FN9 168 aa12.52□□□□□ -0.41
VAMP1-206ENST00000538970 CCNL2Q96S94 520 aaPredicted RBP12.52□□□□□ -0.41
VAMP1-206ENST00000538970 ISCUQ9H1K1 167 aa12.52□□□□□ -0.41
VAMP1-206ENST00000538970 DPEP2Q9H4A9 486 aa12.52□□□□□ -0.41
VAMP1-206ENST00000538970 NOD2Q9HC29 1040 aa12.52□□□□□ -0.41
VAMP1-206ENST00000538970 LRIT1Q9P2V4 623 aa12.52□□□□□ -0.41
VAMP1-206ENST00000538970 PISDQ9UG56 409 aa12.52□□□□□ -0.41
VAMP1-206ENST00000538970 MOSPD1Q9UJG1 213 aa12.52□□□□□ -0.41
VAMP1-206ENST00000538970 ATXN7L1Q9ULK2 861 aaPredicted RBP12.52□□□□□ -0.41
VAMP1-206ENST00000538970 NPIPB15A6NHN6 443 aaPredicted RBP12.51□□□□□ -0.41
VAMP1-206ENST00000538970 SMTNL1A8MU46 457 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 PSMD11O00231 422 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 CEACAM5P06731 702 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 JMJD7P0C870 316 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 RARAP10276 462 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 CCNB1P14635 433 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 ETV3P41162 512 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 MAXP61244 160 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 BOLA3Q53S33 107 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 RALGPS1Q5JS13 557 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 TXNRD3NBQ6F5E7 133 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 TMPRSS9Q7Z410 1059 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 HSD11B1LQ7Z5J1 315 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 C17orf82Q86X59 251 aaPredicted RBP12.51□□□□□ -0.41
VAMP1-206ENST00000538970 NRROSQ86YC3 692 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 JAMLQ86YT9 394 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 SLITRK4Q8IW52 837 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 CBARPQ8N350 705 aaPredicted RBP12.51□□□□□ -0.41
VAMP1-206ENST00000538970 BBS5Q8N3I7 341 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 ATPAF2Q8N5M1 289 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 KIAA1524Q8TCG1 905 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 GPBAR1Q8TDU6 330 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 PTCD2Q8WV60 388 aaKnown RBP12.51□□□□□ -0.41
VAMP1-206ENST00000538970 TMEM159Q96B96 161 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 NAP1L5Q96NT1 182 aaPredicted RBP12.51□□□□□ -0.41
VAMP1-206ENST00000538970 MCCC1Q96RQ3 725 aaPredicted RBP12.51□□□□□ -0.41
VAMP1-206ENST00000538970 TEX101Q9BY14 249 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 FRMD8Q9BZ67 464 aaPredicted RBP12.51□□□□□ -0.41
VAMP1-206ENST00000538970 TRIM4Q9C037 500 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 CARS2Q9HA77 564 aaKnown RBP12.51□□□□□ -0.41
VAMP1-206ENST00000538970 PCDH18Q9HCL0 1135 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 PHPT1Q9NRX4 125 aaPredicted RBP12.51□□□□□ -0.41
VAMP1-206ENST00000538970 KCTD5Q9NXV2 234 aa12.51□□□□□ -0.41
VAMP1-206ENST00000538970 KIF26BQ2KJY2 2108 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 NVLO15381 856 aaKnown RBP12.5□□□□□ -0.41
VAMP1-206ENST00000538970 EFSO43281 561 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 PGLSO95336 258 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 FUCA1P04066 466 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 LIPCP11150 499 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms