RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 CTAGE3PQ8IX95 158 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 MDGA1Q8NFP4 955 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 OR13C4Q8NGS5 318 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 BRSK1Q8TDC3 778 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 GANCQ8TET4 914 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 VOPP1Q96AW1 172 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 ZNF778Q96MU6 729 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 FCRL3Q96P31 734 aaPredicted RBP14.17□□□□□ -0.14
CD4-208ENST00000538827 FAM129BQ96TA1 746 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 FUT8Q9BYC5 575 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 TBC1D17Q9HA65 648 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 PCDH12Q9NPG4 1184 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 C20orf96Q9NUD7 363 aaPredicted RBP14.17□□□□□ -0.14
CD4-208ENST00000538827 B4GALT6Q9UBX8 382 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 PPM1HQ9ULR3 514 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 ITM2BQ9Y287 266 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 TCRBV9S1A1TA0A576 114 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 TCRBV21S2A2A0A5A6 115 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 POC1B-GALNT4F8VUJ3 575 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 MID1O15344 667 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 STX7O15400 261 aaKnown RBP14.16□□□□□ -0.14
CD4-208ENST00000538827 LDB2O43679 373 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 ADH1BP00325 375 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 LMNAP02545 664 aaKnown RBP14.16□□□□□ -0.14
CD4-208ENST00000538827 IVLP07476 585 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 TIMP2P16035 220 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 ZNF140P52738 457 aaPredicted RBP14.16□□□□□ -0.14
CD4-208ENST00000538827 PRAMEP78395 509 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 SATB1Q01826 763 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 MSLNQ13421 630 aaPredicted RBP14.16□□□□□ -0.14
CD4-208ENST00000538827 ARHGEF7Q14155 803 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 PTPRCAPQ14761 206 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 LONRF1Q17RB8 773 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 KLHL38Q2WGJ6 581 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 HSF5Q4G112 596 aaPredicted RBP14.16□□□□□ -0.14
CD4-208ENST00000538827 FBXL19Q6PCT2 694 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 NLRP9Q7RTR0 991 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 TSPAN33Q86UF1 283 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 KCNMB4Q86W47 210 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 UNC5BQ8IZJ1 945 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 TTC30BQ8N4P2 665 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 CERS2Q96G23 380 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 SRPK1Q96SB4 655 aaKnown RBP14.16□□□□□ -0.14
CD4-208ENST00000538827 CCDC77Q9BR77 488 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 SLC6A17Q9H1V8 727 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 RSPH9Q9H1X1 276 aaPredicted RBP14.16□□□□□ -0.14
CD4-208ENST00000538827 MFSD1Q9H3U5 465 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 TRABDQ9H4I3 376 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 FBRSQ9HAH7 460 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 LMAN1LQ9HAT1 526 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 PLAC1Q9HBJ0 212 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 MAGEE1Q9HCI5 957 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 BPIFA1Q9NP55 256 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 DLL3Q9NYJ7 618 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 DKK3Q9UBP4 350 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 MMP17Q9ULZ9 603 aa14.16□□□□□ -0.14
CD4-208ENST00000538827 KANSL1LA0AUZ9 987 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 FAM170BA6NMN3 283 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 GOLGA8CPA6NN73 597 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 RPP40O75818 363 aaKnown RBP14.15□□□□□ -0.14
CD4-208ENST00000538827 PIAS1O75925 651 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 SASH3O75995 380 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 CLDN7O95471 211 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 DNTTP04053 509 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 NUDT17P0C025 328 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 ERVK-10P10266 1014 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 CHRNB1P11230 501 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 ADRB3P13945 408 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 LPOP22079 712 aaPredicted RBP14.15□□□□□ -0.14
CD4-208ENST00000538827 SLCO1A2P46721 670 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 COPAP53621 1224 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 STARD6P59095 220 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 RPS14P62263 151 aaKnown RBP14.15□□□□□ -0.14
CD4-208ENST00000538827 PDE1BQ01064 536 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 THOC5Q13769 683 aaKnown RBP14.15□□□□□ -0.14
CD4-208ENST00000538827 CNGA3Q16281 694 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 UGP2Q16851 508 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 KRT71Q3SY84 523 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 CEP85LQ5SZL2 805 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 ARMC3Q5W041 872 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 LRRC66Q68CR7 880 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 KIAA0930Q6ICG6 404 aaPredicted RBP14.15□□□□□ -0.14
CD4-208ENST00000538827 MICALCLQ6ZW33 695 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 ERN2Q76MJ5 926 aaKnown RBP14.15□□□□□ -0.14
CD4-208ENST00000538827 TTC7BQ86TV6 843 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 TMEM135Q86UB9 458 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 PPM1NQ8N819 430 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 OR4K2Q8NGD2 314 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 EPS8L3Q8TE67 593 aaKnown RBP14.15□□□□□ -0.14
CD4-208ENST00000538827 STYXQ8WUJ0 223 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 CDKL2Q92772 493 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 MCCC1Q96RQ3 725 aaPredicted RBP14.15□□□□□ -0.14
CD4-208ENST00000538827 ACSS3Q9H6R3 686 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 ZFYVE1Q9HBF4 777 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 IARS2Q9NSE4 1012 aaKnown RBP14.15□□□□□ -0.14
CD4-208ENST00000538827 TREX1Q9NSU2 369 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 SLC17A6Q9P2U8 582 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 FKBPLQ9UIM3 349 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 PKP3Q9Y446 797 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 MTF2Q9Y483 593 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms