RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 GEN1Q17RS7 908 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 UGT3A2Q3SY77 523 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 UMODL1-AS1Q8N2C9 162 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 C2orf69Q8N8R5 385 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 ARRDC2Q8TBH0 407 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 DGCR14Q96DF8 476 aaKnown RBP11.98□□□□□ -0.49
CPNE8-203ENST00000538596 CCDC126Q96EE4 140 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 TSPAN17Q96FV3 270 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 FAR2Q96K12 515 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 SUSD3Q96L08 255 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 ZNF512Q96ME7 567 aaPredicted RBP11.98□□□□□ -0.49
CPNE8-203ENST00000538596 VCX3AQ9NNX9 186 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 PRDM5Q9NQX1 630 aaPredicted RBP11.98□□□□□ -0.49
CPNE8-203ENST00000538596 Q9Y3F1 56 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 SLC4A7Q9Y6M7 1214 aa11.98□□□□□ -0.49
CPNE8-203ENST00000538596 LAMA2P24043 3122 aaKnown RBP11.98□□□□□ -0.49
CPNE8-203ENST00000538596 PATJQ8NI35 1801 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 H3BMM5 538 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 PLOD2O00469 737 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 GOT2P00505 430 aaKnown RBP11.97□□□□□ -0.49
CPNE8-203ENST00000538596 SOX11P35716 441 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 INHBCP55103 352 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 BIRC2Q13490 618 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 IKBKEQ14164 716 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 GRB7Q14451 532 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 LPIN1Q14693 890 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 MAPRE1Q15691 268 aaKnown RBP11.97□□□□□ -0.49
CPNE8-203ENST00000538596 PFKFB4Q16877 469 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 KIF19Q2TAC6 998 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 VPS26BQ4G0F5 336 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 FBXL22Q6P050 247 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 AHI1Q8N157 1196 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 AFAP1L2Q8N4X5 818 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 PTGR2Q8N8N7 351 aaPredicted RBP11.97□□□□□ -0.49
CPNE8-203ENST00000538596 PPWD1Q96BP3 646 aaKnown RBP11.97□□□□□ -0.49
CPNE8-203ENST00000538596 SLC39A13Q96H72 371 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 RANBP9Q96S59 729 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 SLC2A11Q9BYW1 496 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 ZYG11BQ9C0D3 744 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 MFSD1Q9H3U5 465 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 DDX18Q9NVP1 670 aaKnown RBP11.97□□□□□ -0.49
CPNE8-203ENST00000538596 TMEM181Q9P2C4 612 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 CROTQ9UKG9 612 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 SARDHQ9UL12 918 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 TLR6Q9Y2C9 796 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 LAMA3Q16787 3333 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 NR5A2O00482 541 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 ZNF623O75123 536 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 CDK14O94921 469 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 CD1DP15813 335 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 UGT1A6P19224 532 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 HTR7P34969 479 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 RGS2P41220 211 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 GRIA3P42263 894 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 PSMD8P48556 350 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 HUNKP57058 714 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 ECT2LQ008S8 904 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 CAPRIN1Q14444 709 aaKnown RBP11.97□□□□□ -0.49
CPNE8-203ENST00000538596 SLC22A9Q8IVM8 553 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 CANT1Q8WVQ1 401 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 RPL10LQ96L21 214 aaKnown RBP11.97□□□□□ -0.49
CPNE8-203ENST00000538596 B3GALT6Q96L58 329 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 SMIM14Q96QK8 99 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 SEMA3CQ99985 751 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 SLC25A23Q9BV35 468 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 ZNF696Q9H7X3 374 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 MID1IP1Q9NPA3 183 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 EGFL7Q9UHF1 273 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 CNOT6Q9ULM6 557 aaKnown RBP11.97□□□□□ -0.49
CPNE8-203ENST00000538596 BTRCQ9Y297 605 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 SLC7A4O43246 635 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 DUSP11O75319 330 aaKnown RBP11.97□□□□□ -0.49
CPNE8-203ENST00000538596 SRP72O76094 671 aaKnown RBP11.97□□□□□ -0.49
CPNE8-203ENST00000538596 PSMC3P17980 439 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 ATP6V1B2P21281 511 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 GPX3P22352 226 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 HERVK_113P63132 956 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 MAPRE2Q15555 327 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 CHERPQ8IWX8 916 aaKnown RBP11.97□□□□□ -0.49
CPNE8-203ENST00000538596 ATAD1Q8NBU5 361 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 DIS3LQ8TF46 1054 aaKnown RBP11.97□□□□□ -0.49
CPNE8-203ENST00000538596 C1orf74Q96LT6 269 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 PPP1R2P1Q96PQ5 205 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 ERVK-6Q9BXR3 956 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 MRPS26Q9BYN8 205 aaKnown RBP11.97□□□□□ -0.49
CPNE8-203ENST00000538596 MAP10Q9P2G4 905 aa11.97□□□□□ -0.49
CPNE8-203ENST00000538596 PRG3Q9Y2Y8 225 aaPredicted RBP11.97□□□□□ -0.49
CPNE8-203ENST00000538596 A0A0J9YYE9 177 aa11.96□□□□□ -0.49
CPNE8-203ENST00000538596 TCRBV3S1A0A5B6 114 aa11.96□□□□□ -0.49
CPNE8-203ENST00000538596 CCDC162PA2VCL2 907 aa11.96□□□□□ -0.49
CPNE8-203ENST00000538596 WASH4PA8MWX3 477 aa11.96□□□□□ -0.49
CPNE8-203ENST00000538596 TNPO2O14787 897 aaKnown RBP11.96□□□□□ -0.49
CPNE8-203ENST00000538596 CLGNO14967 610 aa11.96□□□□□ -0.49
CPNE8-203ENST00000538596 PIP5K1BO14986 540 aa11.96□□□□□ -0.49
CPNE8-203ENST00000538596 SLC2A3P11169 496 aa11.96□□□□□ -0.49
CPNE8-203ENST00000538596 RHOQP17081 205 aa11.96□□□□□ -0.49
CPNE8-203ENST00000538596 TRIM32Q13049 653 aa11.96□□□□□ -0.49
CPNE8-203ENST00000538596 DYNC1I2Q13409 638 aaKnown RBP11.96□□□□□ -0.49
CPNE8-203ENST00000538596 DSC3Q14574 896 aa11.96□□□□□ -0.49
CPNE8-203ENST00000538596 DDIASQ8IXT1 998 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms