RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 ACOX1Q15067 660 aa8.66□□□□□ -1.02
DDB1-212ENST00000538470 SMTNL2Q2TAL5 461 aa8.66□□□□□ -1.02
DDB1-212ENST00000538470 TAF1BQ53T94 588 aaPredicted RBP8.66□□□□□ -1.02
DDB1-212ENST00000538470 SPECC1LQ69YQ0 1117 aa8.66□□□□□ -1.02
DDB1-212ENST00000538470 PNCKQ6P2M8 343 aa8.66□□□□□ -1.02
DDB1-212ENST00000538470 INO80CQ6PI98 192 aaPredicted RBP8.66□□□□□ -1.02
DDB1-212ENST00000538470 PCSK4Q6UW60 755 aa8.66□□□□□ -1.02
DDB1-212ENST00000538470 RAB11FIP2Q7L804 512 aa8.66□□□□□ -1.02
DDB1-212ENST00000538470 SPRED1Q7Z699 444 aa8.66□□□□□ -1.02
DDB1-212ENST00000538470 TAF8Q7Z7C8 310 aa8.66□□□□□ -1.02
DDB1-212ENST00000538470 SYN2Q92777 582 aaPredicted RBP8.66□□□□□ -1.02
DDB1-212ENST00000538470 DTD2Q96FN9 168 aa8.66□□□□□ -1.02
DDB1-212ENST00000538470 CSPG4P5Q96PW8 444 aa8.66□□□□□ -1.02
DDB1-212ENST00000538470 MCCC1Q96RQ3 725 aaPredicted RBP8.66□□□□□ -1.02
DDB1-212ENST00000538470 TEX101Q9BY14 249 aa8.66□□□□□ -1.02
DDB1-212ENST00000538470 LRRN3Q9H3W5 708 aa8.66□□□□□ -1.02
DDB1-212ENST00000538470 CPNE5Q9HCH3 593 aa8.66□□□□□ -1.02
DDB1-212ENST00000538470 EPB41L5Q9HCM4 733 aa8.66□□□□□ -1.02
DDB1-212ENST00000538470 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.66□□□□□ -1.02
DDB1-212ENST00000538470 MYO1AQ9UBC5 1043 aa8.66□□□□□ -1.02
DDB1-212ENST00000538470 IP6K2Q9UHH9 426 aa8.66□□□□□ -1.02
DDB1-212ENST00000538470 RABGEF1Q9UJ41 708 aa8.66□□□□□ -1.02
DDB1-212ENST00000538470 DNPEPQ9ULA0 475 aa8.66□□□□□ -1.02
DDB1-212ENST00000538470 ATXN7L1Q9ULK2 861 aaPredicted RBP8.66□□□□□ -1.02
DDB1-212ENST00000538470 PHTF1Q9UMS5 762 aa8.66□□□□□ -1.02
DDB1-212ENST00000538470 SPTA1P02549 2419 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 A0A1W2PQM1 296 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 B4DGG1 531 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 ZW10O43264 779 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 SERPINC1P01008 464 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 PRB1P04280 392 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 PYGLP06737 847 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 JMJD7P0C870 316 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 CCNB1P14635 433 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 CD82P27701 267 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 UGT1A5P35504 534 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 MMP13P45452 471 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 CCL7P80098 99 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 SLC25A11Q02978 314 aaKnown RBP8.65□□□□□ -1.02
DDB1-212ENST00000538470 CFHR1Q03591 330 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 ILF3Q12906 894 aaKnown RBP eCLIP8.65□□□□□ -1.02
DDB1-212ENST00000538470 ARHGEF7Q14155 803 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 NR1I3Q14994 352 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 NR1D2Q14995 579 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 HADHQ16836 314 aaKnown RBP8.65□□□□□ -1.02
DDB1-212ENST00000538470 ARMC12Q5T9G4 340 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 ARHGAP40Q5TG30 622 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 MARC1Q5VT66 337 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 HGSNATQ68CP4 663 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 KCTD16Q68DU8 428 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 ALG1LQ6GMV1 187 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 RAET1GQ6H3X3 334 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 TIGD7Q6NT04 549 aaPredicted RBP8.65□□□□□ -1.02
DDB1-212ENST00000538470 FOXR1Q6PIV2 292 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 ZNF438Q7Z4V0 828 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 B3GNT8Q7Z7M8 397 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 HEATR4Q86WZ0 1026 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 NDUFAF2Q8N183 169 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 ZNF843Q8N446 348 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 FBXO39Q8N4B4 442 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 FAM71BQ8TC56 605 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 GPBAR1Q8TDU6 330 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 PDCD6IPQ8WUM4 868 aaKnown RBP8.65□□□□□ -1.02
DDB1-212ENST00000538470 HSPH1Q92598 858 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 TTC9Q92623 222 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 FATE1Q969F0 183 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 SCRN2Q96FV2 425 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 GSDMCQ9BYG8 508 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 FRMD8Q9BZ67 464 aaPredicted RBP8.65□□□□□ -1.02
DDB1-212ENST00000538470 B3GNT4Q9C0J1 378 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 TMEM168Q9H0V1 697 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 CARS2Q9HA77 564 aaKnown RBP8.65□□□□□ -1.02
DDB1-212ENST00000538470 PCDH18Q9HCL0 1135 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 CYP4F12Q9HCS2 524 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 ETNK2Q9NVF9 386 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 TRNAU1APQ9NX07 287 aaKnown RBP8.65□□□□□ -1.02
DDB1-212ENST00000538470 AMACRQ9UHK6 382 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 LCMT1Q9UIC8 334 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 ANAPC7Q9UJX3 599 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 PPIL1Q9Y3C6 166 aa8.65□□□□□ -1.02
DDB1-212ENST00000538470 PMS2P1A4D2B8 440 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 NPIPB15A6NHN6 443 aaPredicted RBP8.64□□□□□ -1.03
DDB1-212ENST00000538470 NVLO15381 856 aaKnown RBP8.64□□□□□ -1.03
DDB1-212ENST00000538470 PGLSO95336 258 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 SERPING1P05155 500 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 CYP1A2P05177 515 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 IVLP07476 585 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 RARAP10276 462 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 LIPCP11150 499 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 SKILP12757 684 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 TCF4P15884 667 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 ZNF30P17039 623 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 CA4P22748 312 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 LHCGRP22888 699 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 AMPD1P23109 780 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 PBX1P40424 430 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 ZBED6P86452 979 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 CDK3Q00526 305 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 ZFP36L1Q07352 338 aaKnown RBP8.64□□□□□ -1.03
DDB1-212ENST00000538470 DPTQ07507 201 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms