RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 TKTL2Q9H0I9 626 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 SIK2Q9H0K1 926 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 EBF3Q9H4W6 596 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 ZCCHC4Q9H5U6 513 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 PIGVQ9NUD9 493 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 AGO1Q9UL18 857 aaKnown RBP4.42□□□□□ -1.7
SNHG1-208ENST00000538266 USP18Q9UMW8 372 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 GUCA1BQ9UMX6 200 aa4.42□□□□□ -1.7
SNHG1-208ENST00000538266 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.42□□□□□ -1.7
SNHG1-208ENST00000538266 TCF20Q9UGU0 1960 aaKnown RBP4.42□□□□□ -1.7
SNHG1-208ENST00000538266 TRANK1O15050 2925 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 UBA6A0AVT1 1052 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-208ENST00000538266 CTAGE9A4FU28 777 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 MROH6A6NGR9 719 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 BTNL10A8MVZ5 291 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-208ENST00000538266 NEDD8-MDP1E9PL57 170 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 BUB1O43683 1085 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 NOBOXO60393 691 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 ACSL4O60488 711 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 LRCH4O75427 683 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 MTA2O94776 668 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 PROSCO94903 275 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 KLKB1P03952 638 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 KRT7P08729 469 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 ARSAP15289 507 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 BPIP17213 487 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 MCM3P25205 808 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 CD40P25942 277 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 MIPP30301 263 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 LSP1P33241 339 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 MAN1A1P33908 653 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 ADRA1BP35368 520 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 PCK1P35558 622 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 SLC1A1P43005 524 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 AIF1P55008 147 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 VCPP55072 806 aaKnown RBP4.41□□□□□ -1.7
SNHG1-208ENST00000538266 HADHBP55084 474 aaKnown RBP4.41□□□□□ -1.7
SNHG1-208ENST00000538266 IL13RA1P78552 427 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 ZXDBP98169 803 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 CD83Q01151 205 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 OGDHQ02218 1023 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 NFATC3Q12968 1075 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 CDH18Q13634 790 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 RUNX3Q13761 415 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 LRRC32Q14392 662 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 ZSCAN26Q16670 478 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 PREPLQ4J6C6 727 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-208ENST00000538266 MPPE1Q53F39 396 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 MS4A13Q5J8X5 152 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 RABGAP1LQ5R372 815 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 LY6G5CQ5SRR4 150 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 ERMARDQ5T6L9 678 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 OTUD1Q5VV17 481 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-208ENST00000538266 BROXQ5VW32 411 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 TRIM68Q6AZZ1 485 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 TIGD7Q6NT04 549 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-208ENST00000538266 C11orf63Q6NUN7 778 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 RFWD3Q6PCD5 774 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 C1orf228Q6PIY5 440 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 DAAM2Q86T65 1068 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 PSTKQ8IV42 348 aaKnown RBP4.41□□□□□ -1.7
SNHG1-208ENST00000538266 SYCE1Q8N0S2 351 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 LGI2Q8N0V4 545 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 CPXM2Q8N436 756 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 AFAP1L2Q8N4X5 818 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 ZNF557Q8N988 423 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-208ENST00000538266 ATL2Q8NHH9 583 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 TTC8Q8TAM2 541 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 DDI1Q8WTU0 396 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 HSPH1Q92598 858 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 CENPIQ92674 756 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-208ENST00000538266 AZIN2Q96A70 460 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 NTAN1Q96AB6 310 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 RSPRY1Q96DX4 576 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 TMA16Q96EY4 203 aaKnown RBP4.41□□□□□ -1.7
SNHG1-208ENST00000538266 MSANTD3Q96H12 275 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 SLC39A13Q96H72 371 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 RPRD1AQ96P16 312 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-208ENST00000538266 LRRC3BQ96PB8 259 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 HAPLN3Q96S86 360 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 NAPGQ99747 312 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-208ENST00000538266 FUT8Q9BYC5 575 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 PARD6BQ9BYG5 372 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 PLA2G2FQ9BZM2 168 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 OR10A5Q9H207 317 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 LINC00597Q9H2U6 94 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 MFSD1Q9H3U5 465 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 C8orf33Q9H7E9 229 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-208ENST00000538266 ECT2Q9H8V3 914 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 ZWILCHQ9H900 591 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 BARX1Q9HBU1 254 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-208ENST00000538266 EMC7Q9NPA0 242 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 PARD6AQ9NPB6 346 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 LZTFL1Q9NQ48 299 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 TRPV5Q9NQA5 729 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 ARHGEF3Q9NR81 526 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 SLC2A4RGQ9NR83 387 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 SPHK2Q9NRA0 654 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms