RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 TMCO2Q7Z6W1 182 aaPredicted RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 ADAMTSL2Q86TH1 951 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 DPP10Q8N608 796 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 LRRN4CLQ8ND94 238 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 METTL21AQ8WXB1 218 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 ZNF75CPQ92670 426 aaPredicted RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 NSMCE2Q96MF7 247 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 EBNA1BP2Q99848 306 aaKnown RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 C1orf50Q9BV19 199 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 PRRG3Q9BZD7 231 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 OSBPL2Q9H1P3 480 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 GBA3Q9H227 469 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 FAM83DQ9H4H8 585 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 DNAJC28Q9NX36 388 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 ALKBH4Q9NXW9 302 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 ARMCX1Q9P291 453 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 ZNF229Q9UJW7 825 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 FBXW11Q9UKB1 542 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 ARIH1Q9Y4X5 557 aaPredicted RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 ASB3Q9Y575 518 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 MYADML2A6NDP7 307 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 CTSOP43234 321 aaPredicted RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 MAPKAPK2P49137 400 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 GBE1Q04446 702 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 CAPN13Q6MZZ7 669 aaPredicted RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 TMEM220Q6QAJ8 160 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 KYQ8NBH2 561 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 ZCCHC10Q8TBK6 192 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 MRPL48Q96GC5 212 aaKnown RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 OLFM3Q96PB7 478 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 BRINP2Q9C0B6 783 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 MAGEH1Q9H213 219 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 EBF3Q9H4W6 596 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 EQTNQ9NQ60 294 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 KCTD5Q9NXV2 234 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 COG5Q9UP83 839 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 KCNE2Q9Y6J6 123 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 AHDC1Q5TGY3 1603 aaPredicted RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 CRYBG1Q9Y4K1 1723 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 DCXO43602 365 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 HCRTO43612 131 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 ULK1O75385 1050 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 KRT8P05787 483 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 ITGA2BP08514 1039 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 NR2F1P10589 423 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 ECT2LQ008S8 904 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 MSLNQ13421 630 aaPredicted RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 PDGFRLQ15198 375 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 CARD16Q5EG05 197 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 UBXN11Q5T124 520 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 TYW3Q6IPR3 259 aaKnown RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 PRMT9Q6P2P2 845 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 POMZP3Q6PJE2 187 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 CYP2R1Q6VVX0 501 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 CLEC20AQ6ZU45 233 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 SNX32Q86XE0 403 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 PRSS58Q8IYP2 241 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 ZSCAN18Q8TBC5 510 aaPredicted RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 SETD7Q8WTS6 366 aaKnown RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 HNRNPLLQ8WVV9 542 aaKnown RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 NELL1Q92832 810 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 NUS1Q96E22 293 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 OXNAD1Q96HP4 312 aaPredicted RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 RAD9AQ99638 391 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 IL23AQ9NPF7 189 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 CNTN3Q9P232 1028 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 VPS4AQ9UN37 437 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 NDST3O95803 873 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 OTCP00480 354 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 CCNCP24863 283 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 DDX6P26196 483 aaKnown RBP eCLIP5.36□□□□□ -1.55
LRP6-203ENST00000538239 CMPK1P30085 196 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 ADSSP30520 456 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 SSR2P43308 183 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 NDST2P52849 883 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 IL5RAQ01344 420 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 ZNF844Q08AG5 666 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 MBLAC2Q68D91 279 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 ARHGAP17Q68EM7 881 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 FBXO46Q6PJ61 603 aaPredicted RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 CASP12Q6UXS9 341 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 RTL3Q8N8U3 475 aaKnown RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 TTC29Q8NA56 475 aaPredicted RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 ADCY4Q8NFM4 1077 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 LCN9Q8WX39 176 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 CENPTQ96BT3 561 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 REXO5Q96IC2 774 aaKnown RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 ZDHHC4Q9NPG8 344 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 SNX15Q9NRS6 342 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 FBXO5Q9UKT4 447 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 HNRNPLP14866 589 aaKnown RBP eCLIP5.36□□□□□ -1.55
LRP6-203ENST00000538239 LBPP18428 481 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 NAGLUP54802 743 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 RPS24P62847 133 aaKnown RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 NOMO1Q15155 1222 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 NDUFA9Q16795 377 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 EOGTQ5NDL2 527 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 SH3PXD2AQ5TCZ1 1133 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 HECTD2Q5U5R9 776 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 CHSY3Q70JA7 882 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms