RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 LRRC3Q9BY71 257 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 DRC3Q9H069 523 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 ILKAPQ9H0C8 392 aaPredicted RBP17.48■□□□□ 0.39
SNX17-210ENST00000537606 FAM96AQ9H5X1 160 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 WDR55Q9H6Y2 383 aaPredicted RBP17.48■□□□□ 0.39
SNX17-210ENST00000537606 ZDHHC2Q9UIJ5 367 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 PLA2G4CQ9UP65 541 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 OR51B4Q9Y5P0 310 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 ANKRD36A6QL64 1941 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 LOC100653049A0A140TA62 436 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 TYW5A2RUC4 315 aaKnown RBP17.48■□□□□ 0.39
SNX17-210ENST00000537606 LCHNA4D1U4 455 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 ANKRD66B4E2M5 251 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 NEMP1O14524 444 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 KRT34O76011 436 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 CRTAMO95727 393 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 ALOX15P16050 662 aaPredicted RBP17.48■□□□□ 0.39
SNX17-210ENST00000537606 AOC1P19801 751 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 ZNF140P52738 457 aaPredicted RBP17.48■□□□□ 0.39
SNX17-210ENST00000537606 TSNAXIP1Q2TAA8 658 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 EML3Q32P44 896 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 MRNIPQ6NTE8 343 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 LSMEM2Q8N112 164 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 RYBPQ8N488 228 aaPredicted RBP17.48■□□□□ 0.39
SNX17-210ENST00000537606 DTX3LQ8TDB6 740 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 TCF25Q9BQ70 676 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 POMKQ9H5K3 350 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 LHX3Q9UBR4 397 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 SH3BP1Q9Y3L3 701 aa17.48■□□□□ 0.39
SNX17-210ENST00000537606 RANBP2P49792 3224 aaKnown RBP17.48■□□□□ 0.39
SNX17-210ENST00000537606 UBA6A0AVT1 1052 aaPredicted RBP17.47■□□□□ 0.39
SNX17-210ENST00000537606 SMAD6O43541 496 aaKnown RBP17.47■□□□□ 0.39
SNX17-210ENST00000537606 DCXO43602 365 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 BAIAP3O94812 1187 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 LTA4HP09960 611 aaKnown RBP17.47■□□□□ 0.39
SNX17-210ENST00000537606 GKP32189 559 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 KCNC1P48547 511 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 FAM219BQ5XKK7 198 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 LILRA6Q6PI73 481 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 LCA5Q86VQ0 697 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 PHF21BQ96EK2 531 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 ALG14Q96F25 216 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 ZNF570Q96NI8 536 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 G3BP2Q9UN86 482 aaKnown RBP17.47■□□□□ 0.39
SNX17-210ENST00000537606 PCDHB9Q9Y5E1 797 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 ZBTB14O43829 449 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 PRAMEF12O95522 483 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 HNRNPLP14866 589 aaKnown RBP eCLIP17.47■□□□□ 0.39
SNX17-210ENST00000537606 CCR2P41597 374 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 TIAL1Q01085 375 aaKnown RBP eCLIP17.47■□□□□ 0.39
SNX17-210ENST00000537606 RCN1Q15293 331 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 TECRLQ5HYJ1 363 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 AGAP9Q5VTM2 703 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 PLPP4Q5VZY2 271 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 ARMC3Q5W041 872 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 TLDC1Q6P9B6 456 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 NCEH1Q6PIU2 408 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 EPGNQ6UW88 154 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 SPRED2Q7Z698 418 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 ENDOVQ8N8Q3 282 aaKnown RBP17.47■□□□□ 0.39
SNX17-210ENST00000537606 BADQ92934 168 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 TSPAN17Q96FV3 270 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 UBXN10Q96LJ8 280 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 SLC46A2Q9BY10 475 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 ALG9Q9H6U8 611 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 NLE1Q9NVX2 485 aaPredicted RBP17.47■□□□□ 0.39
SNX17-210ENST00000537606 LSM7Q9UK45 103 aaKnown RBP17.47■□□□□ 0.39
SNX17-210ENST00000537606 OBSL1O75147 1896 aa17.47■□□□□ 0.39
SNX17-210ENST00000537606 TMEM233B4DJY2 109 aa17.46■□□□□ 0.39
SNX17-210ENST00000537606 GFRA2O00451 464 aa17.46■□□□□ 0.39
SNX17-210ENST00000537606 H2AFYO75367 372 aaKnown RBP17.46■□□□□ 0.39
SNX17-210ENST00000537606 FGBP02675 491 aa17.46■□□□□ 0.39
SNX17-210ENST00000537606 CTPS1P17812 591 aa17.46■□□□□ 0.39
SNX17-210ENST00000537606 TFEBP19484 476 aa17.46■□□□□ 0.39
SNX17-210ENST00000537606 CPOXP36551 454 aa17.46■□□□□ 0.39
SNX17-210ENST00000537606 RALGPS1Q5JS13 557 aa17.46■□□□□ 0.39
SNX17-210ENST00000537606 TRIM67Q6ZTA4 783 aa17.46■□□□□ 0.39
SNX17-210ENST00000537606 NUF2Q9BZD4 464 aa17.46■□□□□ 0.39
SNX17-210ENST00000537606 STN1Q9H668 368 aaKnown RBP17.46■□□□□ 0.39
SNX17-210ENST00000537606 CCL26Q9Y258 94 aa17.46■□□□□ 0.39
SNX17-210ENST00000537606 RAP2CQ9Y3L5 183 aa17.46■□□□□ 0.39
SNX17-210ENST00000537606 ARIH1Q9Y4X5 557 aaPredicted RBP17.46■□□□□ 0.39
SNX17-210ENST00000537606 C5orf42Q9H799 3197 aa17.46■□□□□ 0.39
SNX17-210ENST00000537606 C2orf81A6NN90 581 aa17.46■□□□□ 0.38
SNX17-210ENST00000537606 GPR39O43194 453 aa17.46■□□□□ 0.38
SNX17-210ENST00000537606 RFPL2O75678 378 aa17.46■□□□□ 0.38
SNX17-210ENST00000537606 JUNP05412 331 aaKnown RBP17.46■□□□□ 0.38
SNX17-210ENST00000537606 EPHA3P29320 983 aa17.46■□□□□ 0.38
SNX17-210ENST00000537606 FMO4P31512 558 aa17.46■□□□□ 0.38
SNX17-210ENST00000537606 PTDSS1P48651 473 aaKnown RBP17.46■□□□□ 0.38
SNX17-210ENST00000537606 RPL14P50914 215 aaKnown RBP17.46■□□□□ 0.38
SNX17-210ENST00000537606 LAMB3Q13751 1172 aa17.46■□□□□ 0.38
SNX17-210ENST00000537606 TAF1AQ15573 450 aaPredicted RBP17.46■□□□□ 0.38
SNX17-210ENST00000537606 SDCCAG8Q86SQ7 713 aaPredicted RBP17.46■□□□□ 0.38
SNX17-210ENST00000537606 CAMK1DQ8IU85 385 aa17.46■□□□□ 0.38
SNX17-210ENST00000537606 ULK2Q8IYT8 1036 aa17.46■□□□□ 0.38
SNX17-210ENST00000537606 EXT2Q93063 718 aa17.46■□□□□ 0.38
SNX17-210ENST00000537606 FKBPLQ9UIM3 349 aa17.46■□□□□ 0.38
SNX17-210ENST00000537606 FAM50BQ9Y247 325 aa17.46■□□□□ 0.38
SNX17-210ENST00000537606 FIS1Q9Y3D6 152 aa17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms