RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 MAPKAPK2P49137 400 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 CLK1P49759 484 aaKnown RBP8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 DYNLT1P63172 113 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 RUNX1T1Q06455 604 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 SEMA3BQ13214 749 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 LAPTM5Q13571 262 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 MFSD10Q14728 455 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 PDK2Q15119 407 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 UGP2Q16851 508 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 C6orf141Q5SZD1 244 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 ZNF704Q6ZNC4 412 aaPredicted RBP8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 STRADAQ7RTN6 431 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 ADAM32Q8TC27 787 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 AGR3Q8TD06 166 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 INTS12Q96CB8 462 aaKnown RBP8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 LGALS12Q96DT0 336 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 MSANTD3Q96H12 275 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 SAMD11Q96NU1 681 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 RPRD1AQ96P16 312 aaPredicted RBP8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 ZNF300Q96RE9 604 aaPredicted RBP8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 CCDC90BQ9GZT6 254 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 MIR1-1HGQ9H1L0 117 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 NGRNQ9NPE2 291 aaKnown RBP8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 ITM2CQ9NQX7 267 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 EHD3Q9NZN3 535 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 TMPRSS11EQ9UL52 423 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 PCDHGB1Q9Y5G3 927 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 COPG1Q9Y678 874 aaKnown RBP8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 NHSL1Q5SYE7 1610 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 USP17L3A6NCW0 530 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 USP17L4A6NCW7 530 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 ZNF98A6NK75 572 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 TPP1O14773 563 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 DFNA5O60443 496 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 CST8O60676 142 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 OLFM2O95897 454 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 ASS1P00966 412 aaKnown RBP8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 NPR3P17342 541 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 LRPAP1P30533 357 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 SOX9P48436 509 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 TPRG1LQ5T0D9 272 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 CACHD1Q5VU97 1274 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 KCTD1Q719H9 257 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 USP17L1Q7RTZ2 530 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 EFL1Q7Z2Z2 1120 aaKnown RBP8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 THNSL1Q8IYQ7 743 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 PM20D2Q8IYS1 436 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 AMER2Q8N7J2 671 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 CCNYL1Q8N7R7 359 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 SLC7A14Q8TBB6 771 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 SLC7A6Q92536 515 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 COA7Q96BR5 231 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 MYRFLQ96LU7 910 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 MAGEB10Q96LZ2 347 aaPredicted RBP8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 C11orf70Q9BRQ4 267 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 ZNF577Q9BSK1 485 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 WACQ9BTA9 647 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 BTBD2Q9BX70 525 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 VPS33BQ9H267 617 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 SOX17Q9H6I2 414 aaPredicted RBP8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 RANGRFQ9HD47 186 aaPredicted RBP8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 SLC35C2Q9NQQ7 365 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 MID2Q9UJV3 735 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 PTPRFP10586 1907 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 KAT6AQ92794 2004 aa8.54□□□□□ -1.04
SRGAP1-202ENST00000537556 COL16A1Q07092 1604 aaPredicted RBP8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 PHLPP1O60346 1717 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 TANC1Q9C0D5 1861 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 MEIOCA2RUB1 952 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 CCDC154A6NI56 674 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 OR6C70A6NIJ9 312 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 PRSS44E7EML9 344 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 LOC110117498-PIK3R3F6TDL0 507 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 ADAM11O75078 769 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 MAFO75444 373 aaPredicted RBP8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 OR2B3O76000 313 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 LDLRP01130 860 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 ALDOAP04075 364 aaKnown RBP8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 NR3C2P08235 984 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 ACADMP11310 421 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 ADRA2BP18089 450 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 ALDH4A1P30038 563 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 CDH5P33151 784 aaPredicted RBP8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 NKX3-2P78367 333 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 EVX2Q03828 476 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 MGAT3Q09327 533 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 EPS8Q12929 822 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 PRKAA1Q13131 559 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 TNK1Q13470 666 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 CA9Q16790 459 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 NXNL2Q5VZ03 156 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 FAM45BPQ6NSW5 357 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 LLGL2Q6P1M3 1020 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 TMEM65Q6PI78 240 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 CYS1Q717R9 158 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 USP37Q86T82 979 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 TMEM199Q8N511 208 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 PARP16Q8N5Y8 322 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 AADATQ8N5Z0 425 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 OR10T2Q8NGX3 314 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms