RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 IGFBP4P22692 258 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 SMARCB1Q12824 385 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 KCNA10Q16322 511 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 FER1L6Q2WGJ9 1857 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 SLC9B1Q4ZJI4 515 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 IRAK1BP1Q5VVH5 260 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 SEL1L3Q68CR1 1132 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 PSRC1Q6PGN9 363 aaPredicted RBP10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 CHST15Q7LFX5 561 aaPredicted RBP10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 MAVSQ7Z434 540 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 C10orf107Q8IVU9 208 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 CENPNQ96H22 339 aaPredicted RBP10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 KCND2Q9NZV8 630 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 MID2Q9UJV3 735 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 C9IYK1 514 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 BET1O15155 118 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 ACSL4O60488 711 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 HARS2P49590 506 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 HK2P52789 917 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 TLE2Q04725 743 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 PLCL1Q15111 1095 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 KCNT2Q6UVM3 1135 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 FBXL6Q8N531 539 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 URGCPQ8TCY9 931 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 HAS1Q92839 578 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 CCDC90BQ9GZT6 254 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 LRRC40Q9H9A6 602 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 AP4E1Q9UPM8 1137 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 PCDHB12Q9Y5F1 795 aa10.9□□□□□ -0.66
CLSTN3-207ENST00000537408 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 ERVH48-1M5A8F1 160 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 PLK4O00444 970 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 AMHP03971 560 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 CLTBP09497 229 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 YWHABP31946 246 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 DDOSTP39656 456 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 GARSP41250 739 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 KCNA1Q09470 495 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 MFSD10Q14728 455 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 RBM20Q5T481 1227 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 PRR23BQ6ZRT6 265 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 PLEKHM3Q6ZWE6 761 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 ZNF767PQ75MW2 155 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 MCFD2Q8NI22 146 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 HDAC2Q92769 488 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 GIMAP5Q96F15 307 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 DUS3LQ96G46 650 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 APOL4Q9BPW4 351 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 TTYH2Q9BSA4 534 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 PCDHAC1Q9H158 963 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 SPAG4Q9NPE6 437 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 RAD54BQ9Y620 910 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 PMF1-BGLAPU3KQ54 211 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 CNTNAP2Q9UHC6 1331 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 TCRBV3S1A0A5B6 114 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 HDAC3O15379 428 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 PLIN3O60664 434 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 TMEM63AO94886 807 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 KCNK2O95069 426 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 TNNC2P02585 160 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 FGBP02675 491 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 EIF2DP41214 584 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 PRIM2P49643 509 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 CLCNKBP51801 687 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 ACLYP53396 1101 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 PLA2G4FQ68DD2 849 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 XKRXQ6PP77 449 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 AGR3Q8TD06 166 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 KCTD4Q8WVF5 259 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 CPA5Q8WXQ8 436 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 SHC3Q92529 594 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 RIPOR3Q96MK2 946 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 TWNKQ96RR1 684 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 NPAS2Q99743 824 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 C11orf70Q9BRQ4 267 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 DSN1Q9H410 356 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 IFT22Q9H7X7 185 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 TIGARQ9NQ88 270 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 NECTIN3Q9NQS3 549 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 ACTR3BQ9P1U1 418 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 BTBD3Q9Y2F9 522 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 GRIP1Q9Y3R0 1128 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 OR5K3A6NET4 321 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 NDUFS2O75306 463 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 RASAL1O95294 804 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 CLIC3O95833 236 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 WEE1P30291 646 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 GRM5P41594 1212 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 RPS9P46781 194 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 RAP1GAPP47736 663 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 GPLD1P80108 840 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 MOXD1Q6UVY6 613 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 ZBTB33Q86T24 672 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 ZNF677Q86XU0 584 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 PCDH20Q8N6Y1 951 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 KAT5Q92993 513 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 CCDC120Q96HB5 630 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 CLSTN3Q9BQT9 956 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 CFHR5Q9BXR6 569 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms