RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 OR2T34Q8NGX1 318 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 OR2T3Q8NH03 318 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 CPT1BQ92523 772 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 RIT2Q99578 217 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 TINF2Q9BSI4 451 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 TMEM106CQ9BVX2 250 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 SEMA4BQ9NPR2 832 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 CISHQ9NSE2 258 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 BTRCQ9Y297 605 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 A0A1B0GUL6 1792 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 FAM95CA0A1B0GW59 222 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 TEX28O15482 410 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 SCO2O43819 266 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 TSPAN1O60635 241 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 KCNH1O95259 989 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 ITGB3P05106 788 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 UNGP13051 313 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 SLC2A4P14672 509 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 CHRM3P20309 590 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 CCNCP24863 283 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 AZGP1P25311 298 aaKnown RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 SOAT1P35610 550 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 ETV3P41162 512 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 OR2B6P58173 313 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 MBLAC2Q68D91 279 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 REP15Q6BDI9 236 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 PRSS48Q7RTY5 328 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 LINC00523Q86TU6 105 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 FAM131BQ86XD5 332 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 FNDC5Q8NAU1 212 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 LMO3Q8TAP4 145 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 PRR11Q96HE9 360 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 COPS4Q9BT78 406 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 C2orf40Q9H1Z8 148 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 TDRD3Q9H7E2 651 aaKnown RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 JPH1Q9HDC5 661 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 ZNF624Q9P2J8 865 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 TMEM150BA6NC51 233 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 NOS1APO75052 506 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 CYP7B1O75881 506 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 SLITRK3O94933 977 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 ATXN8OSP0DMR3 200 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 C4BPBP20851 252 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 RPS9P46781 194 aaKnown RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 GPX6P59796 221 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 YWHAZP63104 245 aaKnown RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 UBAP2Q5T6F2 1119 aaKnown RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 DDI2Q5TDH0 399 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 ANKRD26P1Q6NSI1 321 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 MZT2BQ6NZ67 158 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 PIWIL4Q7Z3Z4 852 aaKnown RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 SLC7A5P1Q8MH63 180 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 QKIQ96PU8 341 aaKnown RBP eCLIP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 GPR88Q9GZN0 384 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 ZNF395Q9H8N7 513 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 GGA3Q9NZ52 723 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 NYAP2Q9P242 653 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 VPS51Q9UID3 782 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 CDV3Q9UKY7 258 aaKnown RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 UBR2Q8IWV8 1755 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 HAT1O14929 419 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 MSI1O43347 362 aaKnown RBP5.4□□□□□ -1.54
PTPRD-213ENST00000537002 TBX1O43435 398 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 CST1P01037 141 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 CHRNB1P11230 501 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 EFNA5P52803 228 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 STXBP2Q15833 593 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 TIMM50Q3ZCQ8 353 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 PITRM1Q5JRX3 1037 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 COLEC12Q5KU26 742 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 LYSMD3Q7Z3D4 306 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 SLC22A9Q8IVM8 553 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 FAM126BQ8IXS8 530 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 SPARTQ8N0X7 666 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 TMEM102Q8N9M5 508 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-213ENST00000537002 ACDQ96AP0 544 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 FAM167AQ96KS9 214 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 PPP1R2P1Q96PQ5 205 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 NT5C1AQ9BXI3 368 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 TRIM8Q9BZR9 551 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 EIF2B3Q9NR50 452 aaKnown RBP5.4□□□□□ -1.54
PTPRD-213ENST00000537002 BET1O15155 118 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 DYNC1LI2O43237 492 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-213ENST00000537002 KCTD2Q14681 263 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 POU6F1Q14863 301 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 PPM1JQ5JR12 505 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 ZNF470Q6ECI4 717 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 UGT3A1Q6NUS8 523 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 FAM131AQ6UXB0 335 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 FBXO33Q7Z6M2 555 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 PIK3R3Q92569 461 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 GINS4Q9BRT9 223 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 RABL2AQ9UBK7 228 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-213ENST00000537002 PHF11Q9UIL8 331 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 ADAM30Q9UKF2 790 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 ING4Q9UNL4 249 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 TEX264Q9Y6I9 313 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 ATP6AP2A0A1C7CYW4 349 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 TULP3O75386 442 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 ATP6AP2O75787 350 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms