RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 PIH1D2Q8WWB5 315 aa17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 ZCCHC14Q8WYQ9 949 aaKnown RBP17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 LRRC61Q9BV99 259 aa17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 DUSP23Q9BVJ7 150 aa17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 RBM22Q9NW64 420 aaKnown RBP eCLIP17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 JRKLQ9Y4A0 524 aa17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 OR1A2Q9Y585 309 aa17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 RAI2Q9Y5P3 530 aa17.91■□□□□ 0.46
TNFRSF1A-209ENST00000536717 FZD6O60353 706 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 GCATO75600 419 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 HLA-DQB2P05538 268 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 PDHA1P08559 390 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 CKMT1AP12532 417 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 MYF5P13349 255 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 CCNB1P14635 433 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 LHCGRP22888 699 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 DAB2P98082 770 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 DSC2Q02487 901 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 ITKQ08881 620 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 NFATC4Q14934 902 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 PTPRRQ15256 657 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 PRRT3Q5FWE3 981 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 ARMC12Q5T9G4 340 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 MFSD7Q6UXD7 560 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 PELI3Q8N2H9 469 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 CBARPQ8N350 705 aaPredicted RBP17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 C17orf53Q8N3J3 647 aaPredicted RBP17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 LMX1AQ8TE12 382 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 ALG3Q92685 438 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 COQ10AQ96MF6 247 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 LGMNQ99538 433 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 SPASTQ9UBP0 616 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 AMACRQ9UHK6 382 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 PPIL1Q9Y3C6 166 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 PKD1L2Q7Z442 2459 aa17.9■□□□□ 0.46
TNFRSF1A-209ENST00000536717 UNC13CQ8NB66 2214 aa17.89■□□□□ 0.46
TNFRSF1A-209ENST00000536717 KIF26BQ2KJY2 2108 aa17.89■□□□□ 0.46
TNFRSF1A-209ENST00000536717 NPIPB15A6NHN6 443 aaPredicted RBP17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 DDX3YO15523 660 aaKnown RBP17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 KRT37O76014 449 aa17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 HEXIM1O94992 359 aaKnown RBP17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 VIPR1P32241 457 aa17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 CDKN2BP42772 138 aa17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 COPS2P61201 443 aa17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 PPARDQ03181 441 aa17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 PPIDQ08752 370 aaKnown RBP17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 C1orf61Q13536 156 aa17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 ACOX1Q15067 660 aa17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 DEFB133Q30KQ1 61 aa17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 TFDP3Q5H9I0 405 aa17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 HES3Q5TGS1 186 aa17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 SPOCD1Q6ZMY3 1216 aa17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 CCDC13Q8IYE1 715 aa17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 SLC35F6Q8N357 371 aa17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 ARRDC2Q8TBH0 407 aa17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 TSACCQ96A04 125 aaPredicted RBP17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 SCRN2Q96FV2 425 aa17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 TBATAQ96M53 351 aa17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 MCCC1Q96RQ3 725 aaPredicted RBP17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 CLPBQ9H078 707 aa17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 TTLL3Q9Y4R7 772 aa17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 HEY1Q9Y5J3 304 aa17.89■□□□□ 0.45
TNFRSF1A-209ENST00000536717 TPP1O14773 563 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 TRIM23P36406 574 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 HK3P52790 923 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 GNG11P61952 73 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 NIPAL4Q0D2K0 466 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 ALG11Q2TAA5 492 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 FAXCQ5TGI0 409 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 KCTD16Q68DU8 428 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 ESRP1Q6NXG1 681 aaKnown RBP17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 ZCCHC8Q6NZY4 707 aaKnown RBP17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 ENPP7Q6UWV6 458 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 TSPAN33Q86UF1 283 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 RFX6Q8HWS3 928 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 CCNYQ8ND76 341 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 FUBP1Q96AE4 644 aaKnown RBP17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 OLFM3Q96PB7 478 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 SMIM14Q96QK8 99 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 IL12RB2Q99665 862 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 SLC13A1Q9BZW2 595 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 ZFHX4Q86UP3 3567 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 DSPP15924 2871 aaKnown RBP17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 A0A0U1RQS6 177 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 KCNK1O00180 336 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 TAF4O00268 1085 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 APOL1O14791 398 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 CELA2BP08218 269 aaPredicted RBP17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 ALPIP09923 528 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 CYP2A6P11509 494 aaPredicted RBP17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 TSHRP16473 764 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 ZFXP17010 805 aaPredicted RBP17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 CTPS1P17812 591 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 CES1P23141 567 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 HTR1BP28222 390 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 INSM1Q01101 510 aaPredicted RBP17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 TFDP2Q14188 446 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 PPP2R5EQ16537 467 aa17.88■□□□□ 0.45
TNFRSF1A-209ENST00000536717 TAZQ16635 292 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms