RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 ABCE1P61221 599 aaKnown RBP14.02□□□□□ -0.17
LIG1-203ENST00000536218 PHC1P78364 1004 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 ZNF846Q147U1 533 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 TMTC4Q5T4D3 741 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 SIGIRRQ6IA17 410 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 CBR4Q8N4T8 237 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 ABHD11Q8NFV4 315 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 NPY6RQ99463 290 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 TRIT1Q9H3H1 467 aaKnown RBP14.02□□□□□ -0.17
LIG1-203ENST00000536218 FAM96AQ9H5X1 160 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 RNF186Q9NXI6 227 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 SLC17A6Q9P2U8 582 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 PCDHGA11Q9Y5H2 935 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 GOLGA8CPA6NN73 597 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 DAB1O75553 588 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 ALOX5P09917 674 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 RPL34P49207 117 aaKnown RBP14.02□□□□□ -0.17
LIG1-203ENST00000536218 GALNT2Q10471 571 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 RALGDSQ12967 914 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 ANO4Q32M45 955 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 NHSL2Q5HYW2 709 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 TMEM198Q66K66 360 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 CHSY3Q70JA7 882 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 ZNF354CQ86Y25 554 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 SLC38A6Q8IZM9 456 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 GOLM1Q8NBJ4 401 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 ADAMTS16Q8TE57 1224 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 HTR3CQ8WXA8 447 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 TFAP2CQ92754 450 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 RNF34Q969K3 372 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 MYLPFQ96A32 169 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 ZNF347Q96SE7 839 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 BEGAINQ9BUH8 593 aa14.02□□□□□ -0.17
LIG1-203ENST00000536218 FAM149AA5PLN7 773 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 EEF2KO00418 725 aaKnown RBP14.01□□□□□ -0.17
LIG1-203ENST00000536218 AOC2O75106 756 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 ADAMTS4O75173 837 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 SESN2P58004 480 aaPredicted RBP14.01□□□□□ -0.17
LIG1-203ENST00000536218 UPP1Q16831 310 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 CCDC81Q6ZN84 652 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 SLC22A16Q86VW1 577 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 ANKRD13BQ86YJ7 626 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 MOCOSQ96EN8 888 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 SH3YL1Q96HL8 342 aaPredicted RBP14.01□□□□□ -0.17
LIG1-203ENST00000536218 DOK1Q99704 481 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 FANCEQ9HB96 536 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 HMG20AQ9NP66 347 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 SATB2Q9UPW6 733 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 CRYZL1O95825 349 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 PRKAA2P54646 552 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 DAOAP59103 153 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 PLCL1Q15111 1095 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 CCSAPQ6IQ19 270 aaPredicted RBP14.01□□□□□ -0.17
LIG1-203ENST00000536218 TTC23LQ6PF05 361 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 PGAM4Q8N0Y7 254 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 NAT16Q8N8M0 369 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 GLT1D1Q96MS3 346 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 PRDM12Q9H4Q4 367 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 CHST12Q9NRB3 414 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 TMLHEQ9NVH6 421 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 NUDT5Q9UKK9 219 aa14.01□□□□□ -0.17
LIG1-203ENST00000536218 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14□□□□□ -0.17
LIG1-203ENST00000536218 HMX2A2RU54 273 aa14□□□□□ -0.17
LIG1-203ENST00000536218 ZNF195O14628 629 aa14□□□□□ -0.17
LIG1-203ENST00000536218 ACOT8O14734 319 aa14□□□□□ -0.17
LIG1-203ENST00000536218 ICMTO60725 284 aa14□□□□□ -0.17
LIG1-203ENST00000536218 TSHRP16473 764 aa14□□□□□ -0.17
LIG1-203ENST00000536218 IFNA8P32881 189 aa14□□□□□ -0.17
LIG1-203ENST00000536218 IFITM3Q01628 133 aa14□□□□□ -0.17
LIG1-203ENST00000536218 OLIG2Q13516 323 aa14□□□□□ -0.17
LIG1-203ENST00000536218 TNS4Q8IZW8 715 aa14□□□□□ -0.17
LIG1-203ENST00000536218 DEPDC4Q8N2C3 294 aa14□□□□□ -0.17
LIG1-203ENST00000536218 COLGALT1Q8NBJ5 622 aa14□□□□□ -0.17
LIG1-203ENST00000536218 PGLYRP2Q96PD5 576 aa14□□□□□ -0.17
LIG1-203ENST00000536218 ADI1Q9BV57 179 aa14□□□□□ -0.17
LIG1-203ENST00000536218 SOX17Q9H6I2 414 aaPredicted RBP14□□□□□ -0.17
LIG1-203ENST00000536218 AASDHPPTQ9NRN7 309 aa14□□□□□ -0.17
LIG1-203ENST00000536218 AURKCQ9UQB9 309 aa14□□□□□ -0.17
LIG1-203ENST00000536218 I6L893 689 aaPredicted RBP14□□□□□ -0.17
LIG1-203ENST00000536218 KMOO15229 486 aa14□□□□□ -0.17
LIG1-203ENST00000536218 GSRP00390 522 aa14□□□□□ -0.17
LIG1-203ENST00000536218 LTFP02788 710 aa14□□□□□ -0.17
LIG1-203ENST00000536218 OR4Q2P0C623 313 aa14□□□□□ -0.17
LIG1-203ENST00000536218 BMPR1AP36894 532 aa14□□□□□ -0.17
LIG1-203ENST00000536218 SCNN1AP37088 669 aa14□□□□□ -0.17
LIG1-203ENST00000536218 PRKCQQ04759 706 aa14□□□□□ -0.17
LIG1-203ENST00000536218 PCLAFQ15004 111 aa14□□□□□ -0.17
LIG1-203ENST00000536218 FAM117BQ6P1L5 589 aa14□□□□□ -0.17
LIG1-203ENST00000536218 UNC5BQ8IZJ1 945 aa14□□□□□ -0.17
LIG1-203ENST00000536218 CPSF7Q8N684 471 aaKnown RBP14□□□□□ -0.17
LIG1-203ENST00000536218 SPERTQ8NA61 448 aa14□□□□□ -0.17
LIG1-203ENST00000536218 SCAMP5Q8TAC9 235 aa14□□□□□ -0.17
LIG1-203ENST00000536218 P2RY11Q96G91 374 aa14□□□□□ -0.17
LIG1-203ENST00000536218 ZNF641Q96N77 438 aaPredicted RBP14□□□□□ -0.17
LIG1-203ENST00000536218 COQ7Q99807 217 aa14□□□□□ -0.17
LIG1-203ENST00000536218 HOXD1Q9GZZ0 328 aa14□□□□□ -0.17
LIG1-203ENST00000536218 SIK2Q9H0K1 926 aa14□□□□□ -0.17
LIG1-203ENST00000536218 WDR70Q9NW82 654 aa14□□□□□ -0.17
LIG1-203ENST00000536218 EMCNQ9ULC0 261 aa14□□□□□ -0.17
LIG1-203ENST00000536218 RALGAPA2Q2PPJ7 1873 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms