RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 RBM38Q9H0Z9 239 aaKnown RBP15.91■□□□□ 0.14
MCF2L-232ENST00000535094 CD274Q9NZQ7 290 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 EVLQ9UI08 416 aaPredicted RBP15.91■□□□□ 0.14
MCF2L-232ENST00000535094 ADAMTS5Q9UNA0 930 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 SH3PXD2BA1X283 911 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 NPHS1O60500 1241 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 SBK3P0C264 359 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 RPS12P25398 132 aaKnown RBP15.91■□□□□ 0.14
MCF2L-232ENST00000535094 FMO4P31512 558 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 MILR1Q7Z6M3 343 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 SNX29P2Q8IUI4 249 aa15.91■□□□□ 0.14
MCF2L-232ENST00000535094 CMTR2Q8IYT2 770 aaKnown RBP15.91■□□□□ 0.14
MCF2L-232ENST00000535094 FCRL2Q96LA5 508 aaPredicted RBP15.91■□□□□ 0.14
MCF2L-232ENST00000535094 IFT80Q9P2H3 777 aaPredicted RBP15.91■□□□□ 0.14
MCF2L-232ENST00000535094 NOBOXO60393 691 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 SYNCRIPO60506 623 aaKnown RBP15.9■□□□□ 0.14
MCF2L-232ENST00000535094 CBFA2T3O75081 653 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 IL7RP16871 459 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 SERPINH1P50454 418 aaKnown RBP15.9■□□□□ 0.14
MCF2L-232ENST00000535094 APLP1P51693 650 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 KPNA1P52294 538 aaPredicted RBP15.9■□□□□ 0.14
MCF2L-232ENST00000535094 DAOAP59103 153 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 CHRNB3Q05901 458 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 CDYL2Q8N8U2 506 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 SEPT8Q92599 483 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 BRD8Q9H0E9 1235 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 HIPK3Q9H422 1215 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 LIMD1Q9UGP4 676 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 USP22Q9UPT9 525 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 TRIM17Q9Y577 477 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 MAGED1Q9Y5V3 778 aaPredicted RBP15.9■□□□□ 0.14
MCF2L-232ENST00000535094 ST14Q9Y5Y6 855 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 COL6A2P12110 1019 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 ATP6AP1LQ52LC2 224 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 SPESP1Q6UW49 350 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 RETREG3Q86VR2 466 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 CENPSQ8N2Z9 138 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 CPSF7Q8N684 471 aaKnown RBP15.9■□□□□ 0.14
MCF2L-232ENST00000535094 HM13Q8TCT9 377 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 SLC39A8Q9C0K1 460 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 ALG2Q9H553 416 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 CATSPERBQ9H7T0 1116 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 ENTPD7Q9NQZ7 604 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.9■□□□□ 0.14
MCF2L-232ENST00000535094 POMCP01189 267 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 HLA-DQB2P05538 268 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 PCYT1AP49585 367 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 GTF2H3Q13889 308 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 ADCK1Q86TW2 530 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 MFSD6LQ8IWD5 586 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 CRYBG2Q8N1P7 616 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 FBXO39Q8N4B4 442 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 OR10Q1Q8NGQ4 319 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 BDH2Q9BUT1 245 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 ANGPTL3Q9Y5C1 460 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 USP3Q9Y6I4 520 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 SHROOM3Q8TF72 1996 aa15.9■□□□□ 0.14
MCF2L-232ENST00000535094 TMEM247A6NEH6 219 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 MYO1GB0I1T2 1018 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 HS6ST1O60243 411 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 TBC1D4O60343 1298 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 USP2O75604 605 aaPredicted RBP15.89■□□□□ 0.13
MCF2L-232ENST00000535094 DSC2Q02487 901 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 LRP8Q14114 963 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 TMTC4Q5T4D3 741 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 GPR180Q86V85 440 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 SLC15A3Q8IY34 581 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 SLCO4A1Q96BD0 722 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 ABHD8Q96I13 439 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 CHID1Q9BWS9 393 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 M0QZ92 97 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 ONECUT3O60422 494 aaPredicted RBP15.89■□□□□ 0.13
MCF2L-232ENST00000535094 CD247P20963 164 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 MTPNP58546 118 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 TXNL4AP83876 142 aaKnown RBP15.89■□□□□ 0.13
MCF2L-232ENST00000535094 TSTD2Q5T7W7 516 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 MARC1Q5VT66 337 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 CARM1Q86X55 608 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 METTL23Q86XA0 190 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 SFRP1Q8N474 314 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 ZBTB8BQ8NAP8 495 aaPredicted RBP15.89■□□□□ 0.13
MCF2L-232ENST00000535094 ZNF555Q8NEP9 628 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 MUS81Q96NY9 551 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 GMEB1Q9Y692 573 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 KANSL1LA0AUZ9 987 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 PAGE1O75459 146 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 NDUFS3O75489 264 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 DDNO94850 711 aaPredicted RBP15.89■□□□□ 0.13
MCF2L-232ENST00000535094 GLP2RO95838 553 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 PIK3CGP48736 1102 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 HK2P52789 917 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 IST1P53990 364 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 FOXA1P55317 472 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 LAPTM5Q13571 262 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 GALNT3Q14435 633 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 AASDHQ4L235 1098 aaPredicted RBP15.89■□□□□ 0.13
MCF2L-232ENST00000535094 RBM12BQ8IXT5 1001 aaKnown RBP15.89■□□□□ 0.13
MCF2L-232ENST00000535094 ITFG1Q8TB96 612 aa15.89■□□□□ 0.13
MCF2L-232ENST00000535094 HNRNPABQ99729 332 aaKnown RBP15.89■□□□□ 0.13
MCF2L-232ENST00000535094 NACA2Q9H009 215 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms