RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 CLPPQ16740 277 aaPredicted RBP13.9□□□□□ -0.18
CCDC84-208ENST00000534656 AMZ1Q400G9 498 aa13.9□□□□□ -0.18
CCDC84-208ENST00000534656 ZNF574Q6ZN55 896 aaPredicted RBP13.9□□□□□ -0.18
CCDC84-208ENST00000534656 ATG14Q6ZNE5 492 aa13.9□□□□□ -0.18
CCDC84-208ENST00000534656 ARHGAP36Q6ZRI8 547 aa13.9□□□□□ -0.18
CCDC84-208ENST00000534656 RFX8Q6ZV50 586 aa13.9□□□□□ -0.18
CCDC84-208ENST00000534656 ZNF438Q7Z4V0 828 aa13.9□□□□□ -0.18
CCDC84-208ENST00000534656 ZDHHC1Q8WTX9 485 aa13.9□□□□□ -0.18
CCDC84-208ENST00000534656 SPOCK2Q92563 424 aa13.9□□□□□ -0.18
CCDC84-208ENST00000534656 KCTD15Q96SI1 283 aaPredicted RBP13.9□□□□□ -0.18
CCDC84-208ENST00000534656 SNRNP25Q9BV90 132 aaKnown RBP13.9□□□□□ -0.18
CCDC84-208ENST00000534656 TEX101Q9BY14 249 aa13.9□□□□□ -0.18
CCDC84-208ENST00000534656 GSDMCQ9BYG8 508 aa13.9□□□□□ -0.18
CCDC84-208ENST00000534656 CARS2Q9HA77 564 aaKnown RBP13.9□□□□□ -0.18
CCDC84-208ENST00000534656 PHPT1Q9NRX4 125 aaPredicted RBP13.9□□□□□ -0.18
CCDC84-208ENST00000534656 KCTD5Q9NXV2 234 aa13.9□□□□□ -0.18
CCDC84-208ENST00000534656 CHMP5Q9NZZ3 219 aa13.9□□□□□ -0.18
CCDC84-208ENST00000534656 B4GALT6Q9UBX8 382 aa13.9□□□□□ -0.18
CCDC84-208ENST00000534656 PIEZO2Q9H5I5 2752 aa13.9□□□□□ -0.18
CCDC84-208ENST00000534656 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.89□□□□□ -0.19
CCDC84-208ENST00000534656 LGALS16A8MUM7 142 aa13.89□□□□□ -0.19
CCDC84-208ENST00000534656 HGSO14964 777 aaPredicted RBP13.89□□□□□ -0.19
CCDC84-208ENST00000534656 CEACAM5P06731 702 aa13.89□□□□□ -0.19
CCDC84-208ENST00000534656 CCL4P13236 92 aa13.89□□□□□ -0.19
CCDC84-208ENST00000534656 PSMA2P25787 234 aa13.89□□□□□ -0.19
CCDC84-208ENST00000534656 CYP4F2P78329 520 aa13.89□□□□□ -0.19
CCDC84-208ENST00000534656 UBXN1Q04323 297 aa13.89□□□□□ -0.19
CCDC84-208ENST00000534656 ILF3Q12906 894 aaKnown RBP eCLIP13.89□□□□□ -0.19
CCDC84-208ENST00000534656 MAMLD1Q13495 774 aa13.89□□□□□ -0.19
CCDC84-208ENST00000534656 LBRQ14739 615 aaKnown RBP13.89□□□□□ -0.19
CCDC84-208ENST00000534656 CBARPQ8N350 705 aaPredicted RBP13.89□□□□□ -0.19
CCDC84-208ENST00000534656 ARFGAP1Q8N6T3 406 aa13.89□□□□□ -0.19
CCDC84-208ENST00000534656 NPWQ8N729 165 aa13.89□□□□□ -0.19
CCDC84-208ENST00000534656 HTR3CQ8WXA8 447 aa13.89□□□□□ -0.19
CCDC84-208ENST00000534656 NUS1Q96E22 293 aa13.89□□□□□ -0.19
CCDC84-208ENST00000534656 PSKH2Q96QS6 385 aa13.89□□□□□ -0.19
CCDC84-208ENST00000534656 ERGIC2Q96RQ1 377 aa13.89□□□□□ -0.19
CCDC84-208ENST00000534656 PEBP4Q96S96 227 aa13.89□□□□□ -0.19
CCDC84-208ENST00000534656 NUDT22Q9BRQ3 303 aa13.89□□□□□ -0.19
CCDC84-208ENST00000534656 FRMD8Q9BZ67 464 aaPredicted RBP13.89□□□□□ -0.19
CCDC84-208ENST00000534656 PARVAQ9NVD7 372 aa13.89□□□□□ -0.19
CCDC84-208ENST00000534656 TRNAU1APQ9NX07 287 aaKnown RBP13.89□□□□□ -0.19
CCDC84-208ENST00000534656 TAS2R14Q9NYV8 317 aa13.89□□□□□ -0.19
CCDC84-208ENST00000534656 TAAR2Q9P1P5 351 aa13.89□□□□□ -0.19
CCDC84-208ENST00000534656 SEPT3Q9UH03 358 aa13.89□□□□□ -0.19
CCDC84-208ENST00000534656 LIMA1Q9UHB6 759 aaKnown RBP13.89□□□□□ -0.19
CCDC84-208ENST00000534656 PCSK1NQ9UHG2 260 aa13.89□□□□□ -0.19
CCDC84-208ENST00000534656 IGHV5-10-1A0A0J9YXX1 117 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 A0A1W2PQ67 120 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 LRRC10BA6NIK2 292 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 STMND1H3BQB6 276 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 HTRA2O43464 458 aaPredicted RBP13.88□□□□□ -0.19
CCDC84-208ENST00000534656 ECEL1O95672 775 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 CCDC172P0C7W6 258 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 FERP16591 822 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 AK4P27144 223 aaPredicted RBP13.88□□□□□ -0.19
CCDC84-208ENST00000534656 CD1CP29017 333 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 VIPR1P32241 457 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 GPR3P46089 330 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 HCAR3P49019 387 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 SLC10A7Q0GE19 358 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 CNGA3Q16281 694 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 TMCO4Q5TGY1 634 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 PLEKHA7Q6IQ23 1121 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 PPP1R2P3Q6NXS1 205 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 HEATR4Q86WZ0 1026 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 LZTR1Q8N653 840 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 RCBTB1Q8NDN9 531 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 ANKRD20A12PQ8NF67 263 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 ZNF599Q96NL3 588 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 TAAR9Q96RI9 348 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 FUCA2Q9BTY2 467 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 SUDS3Q9H7L9 328 aaPredicted RBP13.88□□□□□ -0.19
CCDC84-208ENST00000534656 SUFUQ9UMX1 484 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 PCDHGC4Q9Y5F7 938 aa13.88□□□□□ -0.19
CCDC84-208ENST00000534656 TTC24A2A3L6 582 aaPredicted RBP13.87□□□□□ -0.19
CCDC84-208ENST00000534656 TMEM191CA6NGB0 347 aa13.87□□□□□ -0.19
CCDC84-208ENST00000534656 SOCS5O75159 536 aa13.87□□□□□ -0.19
CCDC84-208ENST00000534656 PPFIA2O75334 1257 aa13.87□□□□□ -0.19
CCDC84-208ENST00000534656 RNF8O76064 485 aa13.87□□□□□ -0.19
CCDC84-208ENST00000534656 HEXIM1O94992 359 aaKnown RBP13.87□□□□□ -0.19
CCDC84-208ENST00000534656 CPP00450 1065 aa13.87□□□□□ -0.19
CCDC84-208ENST00000534656 FGF3P11487 239 aaPredicted RBP13.87□□□□□ -0.19
CCDC84-208ENST00000534656 CR2P20023 1033 aa13.87□□□□□ -0.19
CCDC84-208ENST00000534656 TNFAIP3P21580 790 aa13.87□□□□□ -0.19
CCDC84-208ENST00000534656 GNPDA1P46926 289 aa13.87□□□□□ -0.19
CCDC84-208ENST00000534656 ARSDP51689 593 aa13.87□□□□□ -0.19
CCDC84-208ENST00000534656 ZNF135P52742 658 aaPredicted RBP13.87□□□□□ -0.19
CCDC84-208ENST00000534656 LIMK2P53671 638 aa13.87□□□□□ -0.19
CCDC84-208ENST00000534656 CDK3Q00526 305 aa13.87□□□□□ -0.19
CCDC84-208ENST00000534656 SQSTM1Q13501 440 aa13.87□□□□□ -0.19
CCDC84-208ENST00000534656 TRA2AQ13595 282 aaKnown RBP eCLIP13.87□□□□□ -0.19
CCDC84-208ENST00000534656 PEX6Q13608 980 aa13.87□□□□□ -0.19
CCDC84-208ENST00000534656 CLCA4Q14CN2 919 aa13.87□□□□□ -0.19
CCDC84-208ENST00000534656 PPP6R3Q5H9R7 873 aaPredicted RBP13.87□□□□□ -0.19
CCDC84-208ENST00000534656 CYP4V2Q6ZWL3 525 aaPredicted RBP13.87□□□□□ -0.19
CCDC84-208ENST00000534656 IRF2BP2Q7Z5L9 587 aa13.87□□□□□ -0.19
CCDC84-208ENST00000534656 PSTKQ8IV42 348 aaKnown RBP13.87□□□□□ -0.19
CCDC84-208ENST00000534656 TP53INP2Q8IXH6 220 aa13.87□□□□□ -0.19
CCDC84-208ENST00000534656 NAGSQ8N159 534 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms