RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	KIAA1024L	P59773	190 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	POLR2F	P61218	127 aa	Known RBP	11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	CLPP	Q16740	277 aa	Predicted RBP	11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	CLEC16A	Q2KHT3	1053 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	FKBP15	Q5T1M5	1219 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	CERCAM	Q5T4B2	595 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	CCDC181	Q5TID7	509 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	USP53	Q70EK8	1073 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	PHLDB2	Q86SQ0	1253 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	ZNF354C	Q86Y25	554 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	OR56A4	Q8NGH8	313 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	ECHDC3	Q96DC8	303 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	EIF3C	Q99613	913 aa	Known RBP	11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	SELENOO	Q9BVL4	669 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	LRRC19	Q9H756	370 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	EPB41L5	Q9HCM4	733 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	STARD5	Q9NSY2	213 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	SEPT10	Q9P0V9	454 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	SIRPG	Q9P1W8	387 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	KLHL42	Q9P2K6	505 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	UBA2	Q9UBT2	640 aa	Predicted RBP	11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	ATP8A1	Q9Y2Q0	1164 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	COQ6	Q9Y2Z9	468 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647	OR1A2	Q9Y585	309 aa		11.6	□□□□□ -0.55
CTNND1-238	ENST00000534647		A0A1W2PQC6	194 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	NUDT21	O43809	227 aa	Known RBP	11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	SLC28A2	O43868	658 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	PIGN	O95427	931 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	JMJD7	P0C870	316 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	KEL	P23276	732 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	CD82	P27701	267 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	STAT1	P42224	750 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	CSRP3	P50461	194 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	POLR2L	P62875	67 aa	Known RBP	11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	UBXN1	Q04323	297 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	TRIM14	Q14142	442 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	HLTF	Q14527	1009 aa	Known RBP eCLIP	11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	AFMID	Q63HM1	303 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	MON1B	Q7L1V2	547 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	RD3	Q7Z3Z2	195 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	C17orf82	Q86X59	251 aa	Predicted RBP	11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	DTX1	Q86Y01	620 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	CCNJL	Q8IV13	435 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	SLITRK4	Q8IW52	837 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	LRRC8A	Q8IWT6	810 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	CCDC112	Q8NEF3	446 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	NCAPG	Q9BPX3	1015 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	CNPY3	Q9BT09	278 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	FOXP3	Q9BZS1	431 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	LOXL2	Q9Y4K0	774 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	AHCTF1	Q8WYP5	2266 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	SPTA1	P02549	2419 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	KIF26B	Q2KJY2	2108 aa		11.59	□□□□□ -0.55
CTNND1-238	ENST00000534647	TMEM202	A6NGA9	273 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	LGALS16	A8MUM7	142 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647		J3KR12	359 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	CACNB4	O00305	520 aa	Predicted RBP	11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	PDE2A	O00408	941 aa	Predicted RBP	11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	EPHB6	O15197	1021 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	TEX33	O43247	280 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	CCP110	O43303	1012 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	CREB3	O43889	395 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	FZD6	O60353	706 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	RECQL5	O94762	991 aa	Predicted RBP	11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	ITGB6	P18564	788 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	SERPINA4	P29622	427 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	B4GALNT1	Q00973	533 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	RALGDS	Q12967	914 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	RFTN1	Q14699	578 aa	Predicted RBP	11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	TGIF1	Q15583	401 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	C14orf28	Q4W4Y0	310 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	KCTD16	Q68DU8	428 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	SCYL2	Q6P3W7	929 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	LIPI	Q6XZB0	460 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	NYAP1	Q6ZVC0	841 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	APTX	Q7Z2E3	356 aa	Known RBP	11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	SPRED1	Q7Z699	444 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	SRL	Q86TD4	932 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	ZSWIM9	Q86XI8	627 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	JAML	Q86YT9	394 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	CAMK1D	Q8IU85	385 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	NETO2	Q8NC67	525 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	PLA2G15	Q8NCC3	412 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	FAM46D	Q8NEK8	389 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	OR1E3	Q8WZA6	343 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	FUBP1	Q96AE4	644 aa	Known RBP	11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	PDXP	Q96GD0	296 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	CMKLR1	Q99788	373 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	KCNF1	Q9H3M0	494 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	ATP13A3	Q9H7F0	1226 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	SYNDIG1	Q9H7V2	258 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	FAM207A	Q9NSI2	230 aa	Predicted RBP	11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	KCTD5	Q9NXV2	234 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	LRIT1	Q9P2V4	623 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	PISD	Q9UG56	409 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	DMGDH	Q9UI17	866 aa	Known RBP	11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	METRN	Q9UJH8	293 aa		11.58	□□□□□ -0.56
CTNND1-238	ENST00000534647	SIK3	Q9Y2K2	1263 aa		11.58	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms