RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 CASC3O15234 703 aaKnown RBP18.49■□□□□ 0.55
CTSB-233ENST00000534636 HTRA2O43464 458 aaPredicted RBP18.49■□□□□ 0.55
CTSB-233ENST00000534636 JMJD7P0C870 316 aa18.49■□□□□ 0.55
CTSB-233ENST00000534636 PNLIPP16233 465 aa18.49■□□□□ 0.55
CTSB-233ENST00000534636 MMP13P45452 471 aa18.49■□□□□ 0.55
CTSB-233ENST00000534636 CNGA3Q16281 694 aa18.49■□□□□ 0.55
CTSB-233ENST00000534636 C14orf28Q4W4Y0 310 aa18.49■□□□□ 0.55
CTSB-233ENST00000534636 MARC1Q5VT66 337 aa18.49■□□□□ 0.55
CTSB-233ENST00000534636 NYAP1Q6ZVC0 841 aa18.49■□□□□ 0.55
CTSB-233ENST00000534636 USP45Q70EL2 814 aa18.49■□□□□ 0.55
CTSB-233ENST00000534636 B3GNT8Q7Z7M8 397 aa18.49■□□□□ 0.55
CTSB-233ENST00000534636 TP53INP2Q8IXH6 220 aa18.49■□□□□ 0.55
CTSB-233ENST00000534636 NDUFAF2Q8N183 169 aa18.49■□□□□ 0.55
CTSB-233ENST00000534636 Q8N9G6 341 aaPredicted RBP18.49■□□□□ 0.55
CTSB-233ENST00000534636 TMEM168Q9H0V1 697 aa18.49■□□□□ 0.55
CTSB-233ENST00000534636 CARS2Q9HA77 564 aaKnown RBP18.49■□□□□ 0.55
CTSB-233ENST00000534636 HAUS2Q9NVX0 235 aa18.49■□□□□ 0.55
CTSB-233ENST00000534636 IP6K2Q9UHH9 426 aa18.49■□□□□ 0.55
CTSB-233ENST00000534636 ANAPC7Q9UJX3 599 aa18.49■□□□□ 0.55
CTSB-233ENST00000534636 APPL1Q9UKG1 709 aa18.49■□□□□ 0.55
CTSB-233ENST00000534636 PCDHGC4Q9Y5F7 938 aa18.49■□□□□ 0.55
CTSB-233ENST00000534636 ZNF462Q96JM2 2506 aa18.49■□□□□ 0.55
CTSB-233ENST00000534636 A0A1W2PQM1 296 aa18.48■□□□□ 0.55
CTSB-233ENST00000534636 TTC24A2A3L6 582 aaPredicted RBP18.48■□□□□ 0.55
CTSB-233ENST00000534636 PMS2P1A4D2B8 440 aa18.48■□□□□ 0.55
CTSB-233ENST00000534636 ZW10O43264 779 aa18.48■□□□□ 0.55
CTSB-233ENST00000534636 C1QL1O75973 258 aa18.48■□□□□ 0.55
CTSB-233ENST00000534636 HEXIM1O94992 359 aaKnown RBP18.48■□□□□ 0.55
CTSB-233ENST00000534636 RARAP10276 462 aa18.48■□□□□ 0.55
CTSB-233ENST00000534636 CCKBRP32239 447 aa18.48■□□□□ 0.55
CTSB-233ENST00000534636 SSR1P43307 286 aaKnown RBP18.48■□□□□ 0.55
CTSB-233ENST00000534636 SKOR1P84550 965 aa18.48■□□□□ 0.55
CTSB-233ENST00000534636 ILF3Q12906 894 aaKnown RBP eCLIP18.48■□□□□ 0.555e-7■■□□□ 12.5
CTSB-233ENST00000534636 NR1I3Q14994 352 aa18.48■□□□□ 0.55
CTSB-233ENST00000534636 ZSCAN23Q3MJ62 389 aa18.48■□□□□ 0.55
CTSB-233ENST00000534636 ARMC12Q5T9G4 340 aa18.48■□□□□ 0.55
CTSB-233ENST00000534636 KCTD16Q68DU8 428 aa18.48■□□□□ 0.55
CTSB-233ENST00000534636 SPECC1LQ69YQ0 1117 aa18.48■□□□□ 0.55
CTSB-233ENST00000534636 HEATR4Q86WZ0 1026 aa18.48■□□□□ 0.55
CTSB-233ENST00000534636 NIPA2Q8N8Q9 360 aa18.48■□□□□ 0.55
CTSB-233ENST00000534636 COQ10AQ96MF6 247 aa18.48■□□□□ 0.55
CTSB-233ENST00000534636 LGR4Q9BXB1 951 aa18.48■□□□□ 0.55
CTSB-233ENST00000534636 GSDMCQ9BYG8 508 aa18.48■□□□□ 0.55
CTSB-233ENST00000534636 SUDS3Q9H7L9 328 aaPredicted RBP18.48■□□□□ 0.55
CTSB-233ENST00000534636 NOD2Q9HC29 1040 aa18.48■□□□□ 0.55
CTSB-233ENST00000534636 ETNK2Q9NVF9 386 aa18.48■□□□□ 0.55
CTSB-233ENST00000534636 A0A1W2PQJ5 194 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 PSMD11O00231 422 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 NUDT21O43809 227 aaKnown RBP18.47■□□□□ 0.55
CTSB-233ENST00000534636 MAFKO60675 156 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 TCF4P15884 667 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 GM2AP17900 193 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 CR2P20023 1033 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 UGT1A5P35504 534 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 MAXP61244 160 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 CFHR1Q03591 330 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 BIRC2Q13490 618 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 PEX6Q13608 980 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 MAP9Q49MG5 647 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 RAET1GQ6H3X3 334 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 OGFOD3Q6PK18 319 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 CCDC81Q6ZN84 652 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 SPRED1Q7Z699 444 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 LRRC49Q8IUZ0 686 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 SYN2Q92777 582 aaPredicted RBP18.47■□□□□ 0.55
CTSB-233ENST00000534636 TMEM159Q96B96 161 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 IQCDQ96DY2 449 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 DTD2Q96FN9 168 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 WBP1Q96G27 269 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 NUP85Q9BW27 656 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 THAP2Q9H0W7 228 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 PCDH18Q9HCL0 1135 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 RCOR3Q9P2K3 495 aaPredicted RBP18.47■□□□□ 0.55
CTSB-233ENST00000534636 LRIT1Q9P2V4 623 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 PISDQ9UG56 409 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 PCDHGA7Q9Y5G6 932 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 SCN8AQ9UQD0 1980 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 PIEZO2Q9H5I5 2752 aa18.47■□□□□ 0.55
CTSB-233ENST00000534636 MYO1FO00160 1098 aa18.46■□□□□ 0.55
CTSB-233ENST00000534636 NOBOXO60393 691 aa18.46■□□□□ 0.55
CTSB-233ENST00000534636 PGLSO95336 258 aa18.46■□□□□ 0.55
CTSB-233ENST00000534636 PEX11BO96011 259 aa18.46■□□□□ 0.55
CTSB-233ENST00000534636 SERPING1P05155 500 aa18.46■□□□□ 0.55
CTSB-233ENST00000534636 CCNB1P14635 433 aa18.46■□□□□ 0.55
CTSB-233ENST00000534636 ETV3P41162 512 aa18.46■□□□□ 0.55
CTSB-233ENST00000534636 CDK3Q00526 305 aa18.46■□□□□ 0.55
CTSB-233ENST00000534636 SLC25A11Q02978 314 aaKnown RBP18.46■□□□□ 0.55
CTSB-233ENST00000534636 ITKQ08881 620 aa18.46■□□□□ 0.55
CTSB-233ENST00000534636 TRAF2Q12933 501 aa18.46■□□□□ 0.55
CTSB-233ENST00000534636 CLN3Q13286 438 aa18.46■□□□□ 0.55
CTSB-233ENST00000534636 HLTFQ14527 1009 aaKnown RBP eCLIP18.46■□□□□ 0.55
CTSB-233ENST00000534636 NFKBIBQ15653 356 aa18.46■□□□□ 0.55
CTSB-233ENST00000534636 HADHQ16836 314 aaKnown RBP18.46■□□□□ 0.55
CTSB-233ENST00000534636 PGBD5Q8N414 524 aa18.46■□□□□ 0.55
CTSB-233ENST00000534636 SNRNP27Q8WVK2 155 aaKnown RBP18.46■□□□□ 0.55
CTSB-233ENST00000534636 TEX101Q9BY14 249 aa18.46■□□□□ 0.55
CTSB-233ENST00000534636 NT5MQ9NPB1 228 aa18.46■□□□□ 0.55
CTSB-233ENST00000534636 AKAP7Q9P0M2 348 aaPredicted RBP18.46■□□□□ 0.55
CTSB-233ENST00000534636 LOXL2Q9Y4K0 774 aa18.46■□□□□ 0.55
CTSB-233ENST00000534636 RNF215Q9Y6U7 377 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms