RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	OVCA2	Q8WZ82	227 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	FGF13	Q92913	245 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ATP6V0A1	Q93050	837 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	RFK	Q969G6	155 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PRR11	Q96HE9	360 aa	Predicted RBP	4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PGBD1	Q96JS3	809 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PRR25	Q96S07	402 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ZHX3	Q9H4I2	956 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CCDC134	Q9H6E4	229 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	KCNK9	Q9NPC2	374 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	KLC4	Q9NSK0	619 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	LIN7C	Q9NUP9	197 aa	Known RBP	4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	TBCCD1	Q9NVR7	557 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	KCTD5	Q9NXV2	234 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	DNAJC16	Q9Y2G8	782 aa		4.82	□□□□□ -1.64
ECHDC1-223	ENST00000534442	FLT1	P17948	1338 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	STX16-NPEPL1	H3BU86	382 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	HAS3	O00219	553 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	STX16	O14662	325 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	YY2	O15391	372 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	HEXIM1	O94992	359 aa	Known RBP	4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CHRNA1	P02708	482 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	XBP1	P17861	261 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CAST	P20810	708 aa	Known RBP	4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	GNLY	P22749	145 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	BDNF	P23560	247 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PCSK6	P29122	969 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ELF1	P32519	619 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	THBS4	P35443	961 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	RXRG	P48443	463 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	DGKQ	P52824	942 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	INHBC	P55103	352 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	VAMP2	P63027	116 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PLP2	Q04941	152 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	RUNX1T1	Q06455	604 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	NEXN	Q0ZGT2	675 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	MAPK7	Q13164	816 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PDCL	Q13371	301 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	GIT2	Q14161	759 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PTPRR	Q15256	657 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	NRN1L	Q496H8	165 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	SPDYA	Q5MJ70	313 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CAPRIN2	Q6IMN6	1127 aa	Known RBP	4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	FAM180B	Q6P0A1	224 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	C16orf89	Q6UX73	402 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ATF7IP	Q6VMQ6	1270 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	RSRC2	Q7L4I2	434 aa	Known RBP	4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PHC2	Q8IXK0	858 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PCYOX1L	Q8NBM8	494 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	XAGE5	Q8WWM1	108 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	NPIPB3	Q92617	1050 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	LENG9	Q96B70	501 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	HVCN1	Q96D96	273 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	KTI12	Q96EK9	354 aa	Predicted RBP	4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	GAD1	Q99259	594 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CLSTN3	Q9BQT9	956 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	REEP2	Q9BRK0	252 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	DPCD	Q9BVM2	203 aa	Predicted RBP	4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	UNC45A	Q9H3U1	944 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	NRDE2	Q9H7Z3	1164 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	VCPKMT	Q9H867	229 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	RAVER2	Q9HCJ3	691 aa	Known RBP	4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	FBXO9	Q9UK97	447 aa	Predicted RBP	4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CNOT11	Q9UKZ1	510 aa	Known RBP	4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	SH2B3	Q9UQQ2	575 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	RCE1	Q9Y256	329 aa		4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	TNRC6B	Q9UPQ9	1833 aa	Known RBP	4.81	□□□□□ -1.64
ECHDC1-223	ENST00000534442	HYDIN	Q4G0P3	5121 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CCDC187	A0A096LP49	1063 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PIPSL	A2A3N6	862 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	C17orf102	A2RUQ5	167 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PSMD9	O00233	223 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PRKCG	P05129	697 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CHRM2	P08172	466 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CTSA	P10619	480 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ITGAM	P11215	1152 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PEPD	P12955	493 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PTGER3	P43115	390 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	MCM2	P49736	904 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	POLG	P54098	1239 aa	Predicted RBP	4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	RPL15	P61313	204 aa	Known RBP	4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	E2F1	Q01094	437 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	MECOM	Q03112	1051 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	TBRG1	Q3YBR2	411 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	LRRC24	Q50LG9	513 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ZNF569	Q5MCW4	686 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	HYI	Q5T013	277 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CC2D1B	Q5T0F9	858 aa	Known RBP	4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	TEDDM1	Q5T9Z0	273 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	KIAA0895L	Q68EN5	471 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	TTLL10	Q6ZVT0	673 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	SLC39A11	Q8N1S5	342 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CXorf38	Q8TB03	319 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CACTIN	Q8WUQ7	758 aa	Known RBP	4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	RRP36	Q96EU6	259 aa	Known RBP	4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	REXO5	Q96IC2	774 aa	Known RBP	4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	FBXL20	Q96IG2	436 aa		4.8	□□□□□ -1.64

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