RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 CALML6Q8TD86 181 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 NDRG1Q92597 394 aaKnown RBP3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 GTF3C6Q969F1 213 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 JAKMIP2Q96AA8 810 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 MIB2Q96AX9 1013 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 MIEF2Q96C03 454 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 ZNF274Q96GC6 653 aaPredicted RBP3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 HPDLQ96IR7 371 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 PPP1R13BQ96KQ4 1090 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 SLITRK1Q96PX8 696 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 FIZ1Q96SL8 496 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 SMOQ99835 787 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 MYOCQ99972 504 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 OR10A5Q9H207 317 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 TMEM245Q9H330 911 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 PABPC3Q9H361 631 aaKnown RBP3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 ZHX3Q9H4I2 956 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 PCIF1Q9H4Z3 704 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 WDR26Q9H7D7 661 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 SGK2Q9HBY8 427 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 PDRG1Q9NUG6 133 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 GDAP2Q9NXN4 497 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 IL37Q9NZH6 218 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 TBC1D7Q9P0N9 293 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 AGO1Q9UL18 857 aaKnown RBP3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 CDH9Q9ULB4 789 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 PLA2G4CQ9UP65 541 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 SLC27A6Q9Y2P4 619 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 DERAQ9Y315 318 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 C2CD2Q9Y426 696 aa3.08□□□□□ -1.92
CHMP4A-208ENST00000534106 NUP210Q8TEM1 1887 aaPredicted RBP3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 MYO16Q9Y6X6 1858 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 CCDC168Q8NDH2 2452 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 PRAMEF33A0A0G2JMD5 474 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 GOLGA6L7A0A1B0GV03 622 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 ANKRD62A6NC57 917 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 VWA3AA6NCI4 1184 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 WIPF3A6NGB9 483 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 C10orf142B7Z368 130 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 K7ENM7 598 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 RNF103O00237 685 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 PPP1R12AO14974 1030 aaPredicted RBP3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 SLC31A1O15431 190 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 NKX2-8O15522 239 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 PRAMEF10O60809 474 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 PFKFB2O60825 505 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 FAM20BO75063 409 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 H2AFYO75367 372 aaKnown RBP3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 CDC45O75419 566 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 STC2O76061 302 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 PIGRP01833 764 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 C4BPAP04003 597 aaKnown RBP3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 AMY2AP04746 511 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 PRKCGP05129 697 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 MMEP08473 750 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 PRLRP16471 622 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 ITIH1P19827 911 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 AMY2BP19961 511 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 WARSP23381 471 aaKnown RBP3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 HLA-FP30511 346 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 SLC8A1P32418 973 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 CD70P32970 193 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 UGT1A5P35504 534 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 ATP5C1P36542 298 aaKnown RBP3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 ETV5P41161 510 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 MAN2A2P49641 1150 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 TOB1P50616 345 aaPredicted RBP3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 SGSHP51688 502 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 SLC5A3P53794 718 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 POLE2P56282 527 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 MAP3K7CLP57077 242 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 ZNF177Q13360 481 aaPredicted RBP3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 C1orf61Q13536 156 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 TCEA2Q15560 299 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 KYAT1Q16773 422 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 EIF2S3LQ2VIR3 472 aaKnown RBP3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 C10orf120Q5SQS8 335 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 TPRG1LQ5T0D9 272 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 C9orf64Q5T6V5 341 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 RNF187Q5TA31 235 aaPredicted RBP3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 FHL5Q5TD97 284 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 SNX30Q5VWJ9 437 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 ZNF776Q68DI1 518 aaPredicted RBP3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 CPLX2Q6PUV4 134 aaKnown RBP3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 MMS22LQ6ZRQ5 1243 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 CHST9Q7L1S5 443 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 MAMDC2Q7Z304 686 aaPredicted RBP3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 ANKS1BQ7Z6G8 1248 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 C14orf80Q86SX3 495 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 CLEC14AQ86T13 490 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 JAZF1Q86VZ6 243 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 GPBP1Q86WP2 473 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 TICAM1Q8IUC6 712 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 STK40Q8N2I9 435 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 LILRB2Q8N423 598 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 FBXO39Q8N4B4 442 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 ARL14Q8N4G2 192 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 OR2T34Q8NGX1 318 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 OR4C6Q8NH72 309 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms