RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 SLC1A2P43004 574 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 RPL14P50914 215 aaKnown RBP9.7□□□□□ -0.86
CHKA-207ENST00000533728 SLC12A2P55011 1212 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 IRX4P78413 519 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 SATB1Q01826 763 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 DUSP4Q13115 394 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 CNGA3Q16281 694 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 FAM83EQ2M2I3 478 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 TRMT5Q32P41 509 aaKnown RBP9.7□□□□□ -0.86
CHKA-207ENST00000533728 RALGPS1Q5JS13 557 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 HECTD3Q5T447 861 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 C6orf163Q5TEZ5 329 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 AGAP9Q5VTM2 703 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 ZNF470Q6ECI4 717 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 NADSYN1Q6IA69 706 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 KLC3Q6P597 504 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 RINLQ6ZS11 566 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 NET1Q7Z628 596 aaPredicted RBP9.7□□□□□ -0.86
CHKA-207ENST00000533728 TTC7BQ86TV6 843 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 TREML1Q86YW5 311 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 SLC22A9Q8IVM8 553 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 CENPLQ8N0S6 344 aaPredicted RBP9.7□□□□□ -0.86
CHKA-207ENST00000533728 TTC9BQ8N6N2 239 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 TTC8Q8TAM2 541 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 BRSK1Q8TDC3 778 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 PSMG2Q969U7 264 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 CMTM5Q96DZ9 223 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 PGLYRP2Q96PD5 576 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 SEPT5Q99719 369 aaPredicted RBP9.7□□□□□ -0.86
CHKA-207ENST00000533728 C19orf43Q9BQ61 176 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 MGME1Q9BQP7 344 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 DENND2DQ9H6A0 471 aaPredicted RBP9.7□□□□□ -0.86
CHKA-207ENST00000533728 TASP1Q9H6P5 420 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 ZNF395Q9H8N7 513 aaPredicted RBP9.7□□□□□ -0.86
CHKA-207ENST00000533728 CACNA2D2Q9NY47 1150 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 IL1RAPL1Q9NZN1 696 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 STK39Q9UEW8 545 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 SEPT3Q9UH03 358 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 STOML2Q9UJZ1 356 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 PLA2G4CQ9UP65 541 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 RUVBL2Q9Y230 463 aaKnown RBP9.7□□□□□ -0.86
CHKA-207ENST00000533728 C15orf41Q9Y2V0 281 aa9.7□□□□□ -0.86
CHKA-207ENST00000533728 CXorf51AA0A1B0GTR3 108 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 ZNF840PA6NDX5 716 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 TBKBP1A7MCY6 615 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 A8MUI8 341 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.69□□□□□ -0.86
CHKA-207ENST00000533728 LDB2O43679 373 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 KDELR3O43731 214 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 ANP32DO95626 131 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 NDST3O95803 873 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 ENO1P06733 434 aaKnown RBP9.69□□□□□ -0.86
CHKA-207ENST00000533728 SERPINF2P08697 491 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 LTA4HP09960 611 aaKnown RBP9.69□□□□□ -0.86
CHKA-207ENST00000533728 SBK3P0C264 359 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 TPBGLP0DKB5 382 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 KITP10721 976 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 CD9P21926 228 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 GLDCP23378 1020 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 PGM1P36871 562 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 ALDH7A1P49419 539 aaKnown RBP9.69□□□□□ -0.86
CHKA-207ENST00000533728 SUOXP51687 545 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 GTF2A1P52655 376 aaPredicted RBP9.69□□□□□ -0.86
CHKA-207ENST00000533728 MPP1Q00013 466 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 IRF9Q00978 393 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 PFKPQ01813 784 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 DSC2Q02487 901 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 GNA12Q03113 381 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 ADAM15Q13444 863 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 ZNF235Q14590 738 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 HERC3Q15034 1050 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 DLG2Q15700 870 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 CFAP157Q5JU67 520 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 SIRPB2Q5JXA9 342 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 FAM45BPQ6NSW5 357 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 FAM117BQ6P1L5 589 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 RSPO2Q6UXX9 243 aaPredicted RBP9.69□□□□□ -0.86
CHKA-207ENST00000533728 MAVSQ7Z434 540 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 TFAP2DQ7Z6R9 452 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 CILP2Q8IUL8 1156 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 SLC41A1Q8IVJ1 513 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 MFN1Q8IWA4 741 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 DENND6AQ8IWF6 608 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.69□□□□□ -0.86
CHKA-207ENST00000533728 PGBD5Q8N414 524 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 FSTL5Q8N475 847 aaPredicted RBP9.69□□□□□ -0.86
CHKA-207ENST00000533728 AFAP1L2Q8N4X5 818 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 CPSF7Q8N684 471 aaKnown RBP9.69□□□□□ -0.86
CHKA-207ENST00000533728 TDRD5Q8NAT2 981 aaKnown RBP9.69□□□□□ -0.86
CHKA-207ENST00000533728 OR13J1Q8NGT2 312 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 ZNF461Q8TAF7 563 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 FAM45AQ8TCE6 357 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 CLP1Q92989 425 aaKnown RBP9.69□□□□□ -0.86
CHKA-207ENST00000533728 IGSF21Q96ID5 467 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 UBXN10Q96LJ8 280 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 PSKH2Q96QS6 385 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 NUDCD1Q96RS6 583 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 EBF4Q9BQW3 602 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 TRMOQ9BU70 441 aa9.69□□□□□ -0.86
CHKA-207ENST00000533728 HERC2P3Q9BVR0 1158 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms