RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 NCF2P19878 526 aaPredicted RBP11.96□□□□□ -0.49
CLP1-205ENST00000533682 CALB2P22676 271 aa11.96□□□□□ -0.49
CLP1-205ENST00000533682 CCR2P41597 374 aa11.96□□□□□ -0.49
CLP1-205ENST00000533682 ERFP50548 548 aa11.96□□□□□ -0.49
CLP1-205ENST00000533682 RASSF2P50749 326 aa11.96□□□□□ -0.49
CLP1-205ENST00000533682 HERC6Q8IVU3 1022 aa11.96□□□□□ -0.49
CLP1-205ENST00000533682 BBS5Q8N3I7 341 aa11.96□□□□□ -0.49
CLP1-205ENST00000533682 PHTF2Q8N3S3 785 aa11.96□□□□□ -0.49
CLP1-205ENST00000533682 OR4L1Q8NH43 312 aa11.96□□□□□ -0.49
CLP1-205ENST00000533682 SHKBP1Q8TBC3 707 aa11.96□□□□□ -0.49
CLP1-205ENST00000533682 PHF21BQ96EK2 531 aa11.96□□□□□ -0.49
CLP1-205ENST00000533682 ZNF570Q96NI8 536 aa11.96□□□□□ -0.49
CLP1-205ENST00000533682 YIPF3Q9GZM5 350 aa11.96□□□□□ -0.49
CLP1-205ENST00000533682 DENND2DQ9H6A0 471 aaPredicted RBP11.96□□□□□ -0.49
CLP1-205ENST00000533682 TNFRSF12AQ9NP84 129 aa11.96□□□□□ -0.49
CLP1-205ENST00000533682 TLR9Q9NR96 1032 aa11.96□□□□□ -0.49
CLP1-205ENST00000533682 NOP53Q9NZM5 478 aaKnown RBP11.96□□□□□ -0.49
CLP1-205ENST00000533682 CFAP97Q9P2B7 532 aa11.96□□□□□ -0.49
CLP1-205ENST00000533682 VPS51Q9UID3 782 aa11.96□□□□□ -0.49
CLP1-205ENST00000533682 STOML2Q9UJZ1 356 aa11.96□□□□□ -0.49
CLP1-205ENST00000533682 OR51B4Q9Y5P0 310 aa11.96□□□□□ -0.49
CLP1-205ENST00000533682 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.96□□□□□ -0.49
CLP1-205ENST00000533682 RPP40O75818 363 aaKnown RBP11.96□□□□□ -0.5
CLP1-205ENST00000533682 COL6A2P12110 1019 aa11.96□□□□□ -0.5
CLP1-205ENST00000533682 ARSAP15289 507 aa11.96□□□□□ -0.5
CLP1-205ENST00000533682 TFEBP19484 476 aa11.96□□□□□ -0.5
CLP1-205ENST00000533682 EPHA3P29320 983 aa11.96□□□□□ -0.5
CLP1-205ENST00000533682 ACVR1Q04771 509 aa11.96□□□□□ -0.5
CLP1-205ENST00000533682 BLMHQ13867 455 aa11.96□□□□□ -0.5
CLP1-205ENST00000533682 Q6ZNB5 142 aa11.96□□□□□ -0.5
CLP1-205ENST00000533682 GLT6D1Q7Z4J2 308 aa11.96□□□□□ -0.5
CLP1-205ENST00000533682 TMC8Q8IU68 726 aa11.96□□□□□ -0.5
CLP1-205ENST00000533682 MFN1Q8IWA4 741 aa11.96□□□□□ -0.5
CLP1-205ENST00000533682 RYBPQ8N488 228 aaPredicted RBP11.96□□□□□ -0.5
CLP1-205ENST00000533682 RBM15BQ8NDT2 890 aaKnown RBP11.96□□□□□ -0.5
CLP1-205ENST00000533682 TTC8Q8TAM2 541 aa11.96□□□□□ -0.5
CLP1-205ENST00000533682 DDI1Q8WTU0 396 aa11.96□□□□□ -0.5
CLP1-205ENST00000533682 ALG14Q96F25 216 aa11.96□□□□□ -0.5
CLP1-205ENST00000533682 CLPTM1LQ96KA5 538 aa11.96□□□□□ -0.5
CLP1-205ENST00000533682 UBXN10Q96LJ8 280 aa11.96□□□□□ -0.5
CLP1-205ENST00000533682 RAB3IPQ96QF0 476 aaPredicted RBP11.96□□□□□ -0.5
CLP1-205ENST00000533682 CORO1BQ9BR76 489 aa11.96□□□□□ -0.5
CLP1-205ENST00000533682 LRRC3Q9BY71 257 aa11.96□□□□□ -0.5
CLP1-205ENST00000533682 NUF2Q9BZD4 464 aa11.96□□□□□ -0.5
CLP1-205ENST00000533682 DRC3Q9H069 523 aa11.96□□□□□ -0.5
CLP1-205ENST00000533682 MRPL46Q9H2W6 279 aaKnown RBP11.96□□□□□ -0.5
CLP1-205ENST00000533682 POMKQ9H5K3 350 aa11.96□□□□□ -0.5
CLP1-205ENST00000533682 ALG9Q9H6U8 611 aa11.96□□□□□ -0.5
CLP1-205ENST00000533682 NKX1-2Q9UD57 310 aaPredicted RBP11.96□□□□□ -0.5
CLP1-205ENST00000533682 G3BP2Q9UN86 482 aaKnown RBP11.96□□□□□ -0.5
CLP1-205ENST00000533682 CCL26Q9Y258 94 aa11.96□□□□□ -0.5
CLP1-205ENST00000533682 LOC100653049A0A140TA62 436 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 ANKRD66B4E2M5 251 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 KIAA0355O15063 1070 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 CCL16O15467 120 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 ZBTB14O43829 449 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 KRT34O76011 436 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 C8AP07357 584 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 CTSAP10619 480 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 TSPAN8P19075 237 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 CLCN5P51795 746 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 ZNF140P52738 457 aaPredicted RBP11.95□□□□□ -0.5
CLP1-205ENST00000533682 CDH18Q13634 790 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 EPGNQ6UW88 154 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 PIANPQ8IYJ0 282 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 TMEM199Q8N511 208 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 TEX9Q8N6V9 391 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 MRPL57Q9BQC6 102 aaKnown RBP11.95□□□□□ -0.5
CLP1-205ENST00000533682 ILKAPQ9H0C8 392 aaPredicted RBP11.95□□□□□ -0.5
CLP1-205ENST00000533682 CATSPERZQ9NTU4 200 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 GALPQ9UBC7 116 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 LHX3Q9UBR4 397 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 FIS1Q9Y3D6 152 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 PCDHB9Q9Y5E1 797 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 PRUNE2Q8WUY3 3088 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 A0A087X1B8 175 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 UBA6A0AVT1 1052 aaPredicted RBP11.95□□□□□ -0.5
CLP1-205ENST00000533682 A6NHS1 94 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 GFRA2O00451 464 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 DCXO43602 365 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 RFPL2O75678 378 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 LUC7L3O95232 432 aaKnown RBP11.95□□□□□ -0.5
CLP1-205ENST00000533682 OLFM2O95897 454 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 APOA4P06727 396 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 MYL4P12829 197 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 ALOX15P16050 662 aaPredicted RBP11.95□□□□□ -0.5
CLP1-205ENST00000533682 CTPS1P17812 591 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 SP100P23497 879 aaPredicted RBP11.95□□□□□ -0.5
CLP1-205ENST00000533682 DNAJB1P25685 340 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 PPP3CCP48454 512 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 POLD2P49005 469 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 TECRLQ5HYJ1 363 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 CFAP157Q5JU67 520 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 CWF19L1Q69YN2 538 aaKnown RBP11.95□□□□□ -0.5
CLP1-205ENST00000533682 LILRA6Q6PI73 481 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 TRIM67Q6ZTA4 783 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 CAMK1DQ8IU85 385 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 RIN3Q8TB24 985 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 PTERQ96BW5 349 aa11.95□□□□□ -0.5
CLP1-205ENST00000533682 EID2BQ96D98 161 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms