RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 RGMBQ6NW40 437 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 ZNF467Q7Z7K2 595 aaPredicted RBP12.27□□□□□ -0.45
BDNF-218ENST00000533246 CLVS1Q8IUQ0 354 aaPredicted RBP12.27□□□□□ -0.45
BDNF-218ENST00000533246 ZNF304Q9HCX3 659 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 TRMT13Q9NUP7 481 aaKnown RBP12.27□□□□□ -0.45
BDNF-218ENST00000533246 TMEM39AQ9NV64 488 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 GIN1Q9NXP7 522 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 GIT1Q9Y2X7 761 aa12.27□□□□□ -0.45
BDNF-218ENST00000533246 BRWD1Q9NSI6 2320 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 GLTPD2A6NH11 291 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 FZD9O00144 591 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 RAD51BO15315 384 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 TRMUO75648 421 aaKnown RBP12.26□□□□□ -0.45
BDNF-218ENST00000533246 LDLRP01130 860 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 KRT6AP02538 564 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 KRT6BP04259 564 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 CHRNGP07510 517 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 TSHRP16473 764 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 PTPN9P43378 593 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 KRT6CP48668 564 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 DAOAP59103 153 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 PERM1Q5SV97 790 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 STXBP5Q5T5C0 1151 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 DCLRE1AQ6PJP8 1040 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 POTEHQ6S545 545 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 ZDHHC14Q8IZN3 488 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
BDNF-218ENST00000533246 ANKRD6Q9Y2G4 727 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 LRRC42Q9Y546 428 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 RAD54BQ9Y620 910 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 SLIT2O94813 1529 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 C5orf60A6NFR6 353 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 PMM2O15305 246 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 ZBTB11O95625 1053 aaPredicted RBP12.26□□□□□ -0.45
BDNF-218ENST00000533246 AP2A1O95782 977 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 AMHP03971 560 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 HSMCR30P0CW71 290 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 GPC1P35052 558 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 GMPRP36959 345 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 CARTPTQ16568 116 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 DHDDSQ86SQ9 333 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 FBXW8Q8N3Y1 598 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 QKIQ96PU8 341 aaKnown RBP eCLIP12.26□□□□□ -0.45
BDNF-218ENST00000533246 PEBP4Q96S96 227 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 HNRNPABQ99729 332 aaKnown RBP12.26□□□□□ -0.45
BDNF-218ENST00000533246 MRPL57Q9BQC6 102 aaKnown RBP12.26□□□□□ -0.45
BDNF-218ENST00000533246 MRPL9Q9BYD2 267 aaKnown RBP12.26□□□□□ -0.45
BDNF-218ENST00000533246 EHD1Q9H4M9 534 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 TRAF6Q9Y4K3 522 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 MYH15Q9Y2K3 1946 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 OR51F1A6NGY5 319 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 KPNA4O00629 521 aaPredicted RBP12.26□□□□□ -0.45
BDNF-218ENST00000533246 BIRC5O15392 142 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 TBL1XO60907 577 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 CYP2C18P33260 490 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 KPNA1P52294 538 aaPredicted RBP12.26□□□□□ -0.45
BDNF-218ENST00000533246 PFKPQ01813 784 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 SP3Q02447 781 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 PITRM1Q5JRX3 1037 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 FAM151BQ6UXP7 276 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 PSMG2Q969U7 264 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 TPD52L3Q96J77 140 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 HEPHQ9BQS7 1158 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 CDH19Q9H159 772 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 OPTCQ9UBM4 332 aa12.26□□□□□ -0.45
BDNF-218ENST00000533246 IQCF5A8MTL0 148 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 TPSB2P20231 275 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 LSAMPQ13449 338 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 TPSAB1Q15661 275 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 CRY1Q16526 586 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 ARHGAP17Q68EM7 881 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 DRICH1Q6PGQ1 229 aaPredicted RBP12.25□□□□□ -0.45
BDNF-218ENST00000533246 OR9Q1Q8NGQ5 310 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 UTP15Q8TED0 518 aaKnown RBP12.25□□□□□ -0.45
BDNF-218ENST00000533246 CRYGNQ8WXF5 182 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 CD101Q93033 1021 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 TRIM63Q969Q1 353 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 MOCOSQ96EN8 888 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 RMND5BQ96G75 393 aaPredicted RBP12.25□□□□□ -0.45
BDNF-218ENST00000533246 ZDHHC6Q9H6R6 413 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 SCN3BQ9NY72 215 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 PTTG2Q9NZH5 202 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 DNMT3LQ9UJW3 386 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 ADAM28Q9UKQ2 775 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 SNX8Q9Y5X2 465 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 RGPD1P0DJD0 1748 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 NRP1O14786 923 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 CD3EAPO15446 510 aaKnown RBP12.25□□□□□ -0.45
BDNF-218ENST00000533246 CCT8P50990 548 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 DOK6Q6PKX4 331 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 RD3Q7Z3Z2 195 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 HERC6Q8IVU3 1022 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 ZC3H3Q8IXZ2 948 aaKnown RBP12.25□□□□□ -0.45
BDNF-218ENST00000533246 FSTL5Q8N475 847 aaPredicted RBP12.25□□□□□ -0.45
BDNF-218ENST00000533246 CLHC1Q8NHS4 586 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 SELENOMQ8WWX9 145 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 FTHL17Q9BXU8 183 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 CLUHO75153 1309 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 SF3B1O75533 1304 aaKnown RBP eCLIP12.25□□□□□ -0.45
BDNF-218ENST00000533246 MAP3K13O43283 966 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms