RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 A8MX80 341 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 TNNT1P13805 278 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 TRIM23P36406 574 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 NR2C2P49116 596 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 HK3P52790 923 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 DSC2Q02487 901 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 TFDP2Q14188 446 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 ELOCQ15369 112 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 TAZQ16635 292 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 ALG11Q2TAA5 492 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 CACTIN-AS1Q8N1I8 211 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 CBARPQ8N350 705 aaPredicted RBP16.67■□□□□ 0.26
PKP3-209ENST00000533069 SDR16C5Q8N3Y7 309 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 PLA2G15Q8NCC3 412 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 ARRDC2Q8TBH0 407 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 GLMNQ92990 594 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 DTD2Q96FN9 168 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 OLFM3Q96PB7 478 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 LGMNQ99538 433 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 WDR26Q9H7D7 661 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 CAAP1Q9H8G2 361 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 KLQ9UEF7 1012 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 PNMA8BQ9ULN7 279 aaPredicted RBP16.67■□□□□ 0.26
PKP3-209ENST00000533069 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.67■□□□□ 0.26
PKP3-209ENST00000533069 JRKLQ9Y4A0 524 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 HYOU1Q9Y4L1 999 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 ALG6Q9Y672 507 aa16.67■□□□□ 0.26
PKP3-209ENST00000533069 USP24Q9UPU5 2620 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 SPEGQ15772 3267 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 KMT2BQ9UMN6 2715 aaPredicted RBP16.66■□□□□ 0.26
PKP3-209ENST00000533069 ASPMQ8IZT6 3477 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 A0A0J9YYE9 177 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 KCNK1O00180 336 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 PDE2AO00408 941 aaPredicted RBP16.66■□□□□ 0.26
PKP3-209ENST00000533069 GCATO75600 419 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 JCHAINP01591 159 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 TRBC1P01850 177 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 ANXA6P08133 673 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 PDHA1P08559 390 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 ALPIP09923 528 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 JUPP14923 745 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 TSHRP16473 764 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 ZNF30P17039 623 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 LHCGRP22888 699 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 CDKN2BP42772 138 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 EPHB1P54762 984 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 SRP54P61011 504 aaKnown RBP16.66■□□□□ 0.26
PKP3-209ENST00000533069 DEFB133Q30KQ1 61 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 HES3Q5TGS1 186 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 PNCKQ6P2M8 343 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 LVRNQ6Q4G3 990 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 ENPP7Q6UWV6 458 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 MFSD7Q6UXD7 560 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 HID1Q8IV36 788 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 KATNAL2Q8IYT4 538 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 PDCD7Q8N8D1 485 aaKnown RBP16.66■□□□□ 0.26
PKP3-209ENST00000533069 FUBP1Q96AE4 644 aaKnown RBP16.66■□□□□ 0.26
PKP3-209ENST00000533069 TCEAL2Q9H3H9 227 aaPredicted RBP16.66■□□□□ 0.26
PKP3-209ENST00000533069 ZMIZ1Q9ULJ6 1067 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 DGKBQ9Y6T7 804 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 DUSP10Q9Y6W6 482 aa16.66■□□□□ 0.26
PKP3-209ENST00000533069 DOCK9Q9BZ29 2069 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 LY6G6EA0A0G2JKS1 128 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 FAM149AA5PLN7 773 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 CAPN8A6NHC0 703 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 MIF4GDA9UHW6 222 aaKnown RBP16.65■□□□□ 0.26
PKP3-209ENST00000533069 TNFRSF10CO14798 259 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 MYCLP1P12525 358 aaPredicted RBP16.65■□□□□ 0.26
PKP3-209ENST00000533069 CTSEP14091 401 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 CTPS1P17812 591 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 TEAD1P28347 426 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 ETV3P41162 512 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 RPIAP49247 311 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 GNG11P61952 73 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 DYNLT1P63172 113 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 NIPAL4Q0D2K0 466 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 AP1B1Q10567 949 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 C1orf61Q13536 156 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 CAMK2BQ13554 666 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 TFDP3Q5H9I0 405 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 ZNF569Q5MCW4 686 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 C6orf132Q5T0Z8 1188 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 SPOCD1Q6ZMY3 1216 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 HSD11B1LQ7Z5J1 315 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 DAAM2Q86T65 1068 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 RAVER1Q8IY67 606 aaKnown RBP16.65■□□□□ 0.26
PKP3-209ENST00000533069 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.65■□□□□ 0.26
PKP3-209ENST00000533069 OR56A4Q8NGH8 313 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 LRRN4Q8WUT4 740 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 SCG3Q8WXD2 468 aaKnown RBP16.65■□□□□ 0.26
PKP3-209ENST00000533069 RBM41Q96IZ5 413 aaKnown RBP16.65■□□□□ 0.26
PKP3-209ENST00000533069 BOCQ9BWV1 1114 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 CCDC86Q9H6F5 360 aaKnown RBP16.65■□□□□ 0.26
PKP3-209ENST00000533069 PCDH9Q9HC56 1237 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 PHPT1Q9NRX4 125 aaPredicted RBP16.65■□□□□ 0.26
PKP3-209ENST00000533069 DKK4Q9UBT3 224 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 TRIM10Q9UDY6 481 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 DOLKQ9UPQ8 538 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 U3KQA8 63 aa16.65■□□□□ 0.26
PKP3-209ENST00000533069 MAP1BP46821 2468 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms