RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 ACADVLP49748 655 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 PPARDQ03181 441 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 TEX44Q53QW1 395 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 HS1BP3Q53T59 392 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 CCDC157Q569K6 752 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 FAXCQ5TGI0 409 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 ESRP1Q6NXG1 681 aaKnown RBP15.38■□□□□ 0.05
CPSF1-210ENST00000532935 CRTC1Q6UUV9 634 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 ENPP7Q6UWV6 458 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 BBS12Q6ZW61 710 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 NT5DC3Q86UY8 548 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 ZC3H18Q86VM9 953 aaKnown RBP15.38■□□□□ 0.05
CPSF1-210ENST00000532935 PHACTR4Q8IZ21 702 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 RBFAQ8N0V3 343 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 PELI3Q8N2H9 469 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 LPCAT1Q8NF37 534 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 ATL2Q8NHH9 583 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 FUBP1Q96AE4 644 aaKnown RBP15.38■□□□□ 0.05
CPSF1-210ENST00000532935 DTD2Q96FN9 168 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 IMP4Q96G21 291 aaKnown RBP15.38■□□□□ 0.05
CPSF1-210ENST00000532935 CNTNAP3BQ96NU0 1288 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 RBM15Q96T37 977 aaKnown RBP eCLIP15.38■□□□□ 0.055e-7■□□□□ 9.7
CPSF1-210ENST00000532935 CNTNAP3Q9BZ76 1288 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 SLC13A1Q9BZW2 595 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 SLC25A51Q9H1U9 297 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 SPASTQ9UBP0 616 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 AMFRQ9UKV5 643 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 PCDHGA1Q9Y5H4 931 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 CSNK1G3Q9Y6M4 447 aa15.38■□□□□ 0.05
CPSF1-210ENST00000532935 A0A0U1RQS6 177 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 FAM221BA6H8Z2 402 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 K7ESM1 405 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 CACNB4O00305 520 aaPredicted RBP15.37■□□□□ 0.05
CPSF1-210ENST00000532935 ZNF30P17039 623 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 CKMT2P17540 419 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 PTPN7P35236 360 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 TRIM23P36406 574 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 RWDD2BP57060 319 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 KIAA1024LP59773 190 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 PRRT3Q5FWE3 981 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 LRRC66Q68CR7 880 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 PNCKQ6P2M8 343 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 Q6ZVL8 140 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 PEX26Q7Z412 305 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 SYCE1Q8N0S2 351 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 LMX1AQ8TE12 382 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 ALG3Q92685 438 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 TSACCQ96A04 125 aaPredicted RBP15.37■□□□□ 0.05
CPSF1-210ENST00000532935 TEKT5Q96M29 485 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 TBATAQ96M53 351 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 WDR92Q96MX6 357 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 QKIQ96PU8 341 aaKnown RBP eCLIP15.37■□□□□ 0.05
CPSF1-210ENST00000532935 HERPUD2Q9BSE4 406 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 LRRC61Q9BV99 259 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 DUSP23Q9BVJ7 150 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 OSBPL8Q9BZF1 889 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 GLOD4Q9HC38 313 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 DNPEPQ9ULA0 475 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 EFR3BQ9Y2G0 817 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 MSRB2Q9Y3D2 182 aa15.37■□□□□ 0.05
CPSF1-210ENST00000532935 SCN8AQ9UQD0 1980 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 HACD1B0YJ81 288 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 APOC4-APOC2K7ER74 178 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 MTSS1O43312 755 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 GCATO75600 419 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 RFPL3O75679 317 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 APOC2P02655 101 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 HOXC4P09017 264 aaPredicted RBP15.36■□□□□ 0.05
CPSF1-210ENST00000532935 C1SP09871 688 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 TSHRP16473 764 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 BLKP51451 505 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 HK3P52790 923 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 SRP54P61011 504 aaKnown RBP15.36■□□□□ 0.05
CPSF1-210ENST00000532935 PTSQ03393 145 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 WASHC5Q12768 1159 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 C1orf61Q13536 156 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 SLC14A2Q15849 920 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 QPCTQ16769 361 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 ALG11Q2TAA5 492 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 CCDC181Q5TID7 509 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 DHRS13Q6UX07 377 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 RFLNAQ6ZTI6 216 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 NYAP1Q6ZVC0 841 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 TECPR1Q7Z6L1 1165 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 HID1Q8IV36 788 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 TADA1Q96BN2 335 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 LYSMD1Q96S90 227 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 ADGRE3Q9BY15 652 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 WDR26Q9H7D7 661 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 KLQ9UEF7 1012 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 ADGRG1Q9Y653 693 aa15.36■□□□□ 0.05
CPSF1-210ENST00000532935 ZFC3H1O60293 1989 aaKnown RBP15.36■□□□□ 0.05
CPSF1-210ENST00000532935 ARHGEF17Q96PE2 2063 aaPredicted RBP15.36■□□□□ 0.05
CPSF1-210ENST00000532935 KNTC1P50748 2209 aa15.35■□□□□ 0.05
CPSF1-210ENST00000532935 ASXL3Q9C0F0 2248 aa15.35■□□□□ 0.05
CPSF1-210ENST00000532935 GOLGA6CA6NDK9 693 aa15.35■□□□□ 0.05
CPSF1-210ENST00000532935 GOLGA6BA6NDN3 693 aa15.35■□□□□ 0.05
CPSF1-210ENST00000532935 TMEM202A6NGA9 273 aa15.35■□□□□ 0.05
CPSF1-210ENST00000532935 ANKRD66B4E2M5 251 aa15.35■□□□□ 0.05
CPSF1-210ENST00000532935 RASGRP1O95267 797 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms