RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 ZNF793Q6ZN11 406 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 PQLC2Q6ZP29 291 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 FAM47EQ6ZV65 393 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 MTSS1LQ765P7 747 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 DPPA4Q7L190 304 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 LINGO2Q7L985 606 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 VSIG1Q86XK7 387 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 SFTPA2Q8IWL1 248 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 RBFAQ8N0V3 343 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 MMP21Q8N119 569 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 GALNT16Q8N428 558 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 MINDY1Q8N5J2 469 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 BOLLQ8N9W6 283 aaKnown RBP3.05□□□□□ -1.92
CD44-234ENST00000531873 AVL9Q8NBF6 648 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 POGLUT1Q8NBL1 392 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 CEP76Q8TAP6 659 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 GPT2Q8TD30 523 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 HASPINQ8TF76 798 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 DPF1Q92782 380 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 ZNF622Q969S3 477 aaKnown RBP eCLIP3.05□□□□□ -1.92
CD44-234ENST00000531873 ERGIC1Q969X5 290 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 LRRC59Q96AG4 307 aaKnown RBP3.05□□□□□ -1.92
CD44-234ENST00000531873 TMEM18Q96B42 140 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 TMCO6Q96DC7 493 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 CEP295NLQ96MC4 621 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 TTC14Q96N46 770 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 GAD1Q99259 594 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 AGAP2Q99490 1192 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 FAM118BQ9BPY3 351 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 TUBB6Q9BUF5 446 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 MRPL1Q9BYD6 325 aaKnown RBP3.05□□□□□ -1.92
CD44-234ENST00000531873 EDEM3Q9BZQ6 932 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 RABEP2Q9H5N1 569 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 ESRP2Q9H6T0 727 aaKnown RBP3.05□□□□□ -1.92
CD44-234ENST00000531873 MKKSQ9NPJ1 570 aaPredicted RBP3.05□□□□□ -1.92
CD44-234ENST00000531873 SLC35C2Q9NQQ7 365 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 CYSLTR2Q9NS75 346 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 MRGBPQ9NV56 204 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 CISD1Q9NZ45 108 aaKnown RBP3.05□□□□□ -1.92
CD44-234ENST00000531873 MSRB1Q9NZV6 116 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 ANAPC2Q9UJX6 822 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 PLAGL1Q9UM63 463 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 CMAHPQ9Y471 501 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 NFE2L3Q9Y4A8 694 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 DMRT1Q9Y5R6 373 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 CLIC4Q9Y696 253 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 SLC4A4Q9Y6R1 1079 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 TAF1P21675 1872 aa3.05□□□□□ -1.92
CD44-234ENST00000531873 ARHGEF40Q8TER5 1519 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 A0A1B0GVM2 712 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 hCG_1809904A0A1W2PP81 198 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 A0A1W2PPE2 198 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 A0A1W2PR64 198 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 TMEM202A6NGA9 273 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 ZNF814B7Z6K7 855 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 VCYO14598 125 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 ATP2A1O14983 1001 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 OGG1O15527 345 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 PLRG1O43660 514 aaKnown RBP3.04□□□□□ -1.92
CD44-234ENST00000531873 PPFIA2O75334 1257 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 MMP3P08254 477 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 TFPIP10646 304 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 TMEM11P17152 192 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 CHATP28329 748 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 INHBCP55103 352 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 KRT83P78385 493 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 SORDQ00796 357 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 ECT2LQ008S8 904 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 SPOCK1Q08629 439 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 FOXF2Q12947 444 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 PRPF4BQ13523 1007 aaKnown RBP3.04□□□□□ -1.92
CD44-234ENST00000531873 SCARB2Q14108 478 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 IL11RAQ14626 422 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 PLCB4Q15147 1175 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 NAB2Q15742 525 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 DUSP6Q16828 381 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 ZNF628Q5EBL2 1059 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 TCP11X2Q5H9J9 407 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 C9orf152Q5JTZ5 239 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 KRBOX4Q5JUW0 171 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 RARS2Q5T160 578 aaKnown RBP3.04□□□□□ -1.92
CD44-234ENST00000531873 HECTD3Q5T447 861 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 IL27RAQ6UWB1 636 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 SLFN11Q7Z7L1 901 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 GALNT13Q8IUC8 556 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 WDR63Q8IWG1 891 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 FAM217AQ8IXS0 508 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 SCYL3Q8IZE3 742 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 SYT2Q8N9I0 419 aaPredicted RBP3.04□□□□□ -1.92
CD44-234ENST00000531873 POMGNT2Q8NAT1 580 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 ARRDC2Q8TBH0 407 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 TRPC4APQ8TEL6 797 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 PTPMT1Q8WUK0 201 aaPredicted RBP3.04□□□□□ -1.92
CD44-234ENST00000531873 VPS33AQ96AX1 596 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 EGLN2Q96KS0 407 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 SIGLEC11Q96RL6 698 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 ACOX2Q99424 681 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 WDR77Q9BQA1 342 aaPredicted RBP3.04□□□□□ -1.92
CD44-234ENST00000531873 KIFC3Q9BVG8 833 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 KCNN2Q9H2S1 579 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms