RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 DAB2IPQ5VWQ8 1189 aa6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 CST9LP1Q5W188 147 aa6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 SHQ1Q6PI26 577 aaKnown RBP6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 RBPMS2Q6ZRY4 209 aaKnown RBP6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 FAM57BQ71RH2 274 aa6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 HIST3H2AQ7L7L0 130 aa6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 SPRED1Q7Z699 444 aa6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 METTL23Q86XA0 190 aa6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 ARID3BQ8IVW6 561 aaPredicted RBP6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 MCEMP1Q8IX19 187 aa6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 GUF1Q8N442 669 aaKnown RBP6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 TC2NQ8N9U0 490 aa6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 OR8K5Q8NH50 307 aa6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 PIGOQ8TEQ8 1089 aa6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 DEPDC1BQ8WUY9 529 aa6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 CEP295NLQ96MC4 621 aa6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 HGH1Q9BTY7 390 aa6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 DUSP26Q9BV47 211 aa6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 SCNM1Q9BWG6 230 aa6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 LHPPQ9H008 270 aa6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 KLK15Q9H2R5 256 aa6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 CRNNQ9UBG3 495 aaPredicted RBP6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 TUBE1Q9UJT0 475 aa6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 ERVK-11Q9UQG0 969 aa6.52□□□□□ -1.37
CAPRIN1-208ENST00000530008 ZNF335Q9H4Z2 1342 aaPredicted RBP6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 FNDC1Q4ZHG4 1894 aaPredicted RBP6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 AKR1B15C9JRZ8 316 aaPredicted RBP6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 PLRG1O43660 514 aaKnown RBP6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 TADA2AO75478 443 aa6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 MMP3P08254 477 aa6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 TNFSF8P32971 234 aa6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 MC5RP33032 325 aa6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 CSE1LP55060 971 aaKnown RBP6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 TMF1P82094 1093 aa6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 MRPS34P82930 218 aaKnown RBP6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 LPIN1Q14693 890 aa6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 C2orf68Q2NKX9 166 aa6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 IGFL4Q6B9Z1 124 aa6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 TRAT1Q6PIZ9 186 aa6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 GLRX5Q86SX6 157 aa6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 EPHX4Q8IUS5 362 aa6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 HORMAD2Q8N7B1 307 aa6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 XXYLT1Q8NBI6 393 aa6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 SECISBP2LQ93073 1101 aaKnown RBP6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 ZNF570Q96NI8 536 aa6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 FNBP1Q96RU3 617 aa6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 ZNF341Q9BYN7 854 aa6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 C2orf40Q9H1Z8 148 aa6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 AAMDCQ9H7C9 122 aa6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 PFDN4Q9NQP4 134 aa6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 MTMR10Q9NXD2 777 aa6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 COPG2Q9UBF2 871 aa6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 CLIC4Q9Y696 253 aa6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 SLC4A4Q9Y6R1 1079 aa6.51□□□□□ -1.37
CAPRIN1-208ENST00000530008 ARHGEF40Q8TER5 1519 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 KIR2DS5A0A0G2JLQ3 304 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 KIR2DS3K7RE56 304 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 ATP2A1O14983 1001 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 MTA2O94776 668 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 SLU7O95391 586 aaKnown RBP6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 CLDN7O95471 211 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 FYNP06241 537 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 FDPSP14324 419 aaKnown RBP6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 TLX1P31314 330 aaPredicted RBP6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 DCTDP32321 178 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 PRCPP42785 496 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 GPR143P51810 404 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 CTSWP56202 376 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 TUBA4AP68366 448 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 FAM27E3Q08E93 113 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 STIM1Q13586 685 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 MIDNQ504T8 468 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 PLEKHA7Q6IQ23 1121 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 SUSD1Q6UWL2 747 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 Q6ZPA2 131 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 DPPA4Q7L190 304 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 TAOK1Q7L7X3 1001 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 CAMKMTQ7Z624 323 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 C8orf58Q8NAV2 365 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 TRPC4APQ8TEL6 797 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 LPGAT1Q92604 370 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 VCPIP1Q96JH7 1222 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 ZNF333Q96JL9 665 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 CDRT15Q96T59 188 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 ACOX2Q99424 681 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 CITED2Q99967 270 aaPredicted RBP6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 RAPGEFL1Q9UHV5 662 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 FBXW11Q9UKB1 542 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 TLK1Q9UKI8 766 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 ZNF148Q9UQR1 794 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 SNX5Q9Y5X3 404 aa6.5□□□□□ -1.37
CAPRIN1-208ENST00000530008 TMEM202A6NGA9 273 aa6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 C1QTNF3-AMACRE9PGA6 284 aa6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 F8W810 466 aa6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 FOXD2O60548 495 aaPredicted RBP6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 RECQL5O94762 991 aaPredicted RBP6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 RGS11O94810 467 aa6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 BCL10O95999 233 aa6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 MYZAPP0CAP1 466 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms