RNA–Protein interactions for RNA: ENST00000529724.1

PPP1CA-206, Transcript of protein phosphatase 1 catalytic subunit alpha, human

TSL 2

Gene PPP1CA, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1CA-206	ENST00000529724	ZNF783	Q6ZMS7	281 aa		10.45	□□□□□ -0.74
PPP1CA-206	ENST00000529724	DEFB106A	Q8N104	65 aa		10.45	□□□□□ -0.74
PPP1CA-206	ENST00000529724	NXPE1	Q8N323	547 aa		10.45	□□□□□ -0.74
PPP1CA-206	ENST00000529724	SEC14L1	Q92503	715 aa		10.45	□□□□□ -0.74
PPP1CA-206	ENST00000529724	NCSTN	Q92542	709 aa		10.45	□□□□□ -0.74
PPP1CA-206	ENST00000529724	AHCYL2	Q96HN2	611 aa	Known RBP	10.45	□□□□□ -0.74
PPP1CA-206	ENST00000529724	THAP9	Q9H5L6	903 aa		10.45	□□□□□ -0.74
PPP1CA-206	ENST00000529724	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	10.45	□□□□□ -0.74
PPP1CA-206	ENST00000529724	PCDH12	Q9NPG4	1184 aa		10.45	□□□□□ -0.74
PPP1CA-206	ENST00000529724	ST7	Q9NRC1	585 aa		10.45	□□□□□ -0.74
PPP1CA-206	ENST00000529724	TRNAU1AP	Q9NX07	287 aa	Known RBP	10.45	□□□□□ -0.74
PPP1CA-206	ENST00000529724	FAM13B	Q9NYF5	915 aa		10.45	□□□□□ -0.74
PPP1CA-206	ENST00000529724	KLHL3	Q9UH77	587 aa		10.45	□□□□□ -0.74
PPP1CA-206	ENST00000529724	TRAF3IP3	Q9Y228	551 aa		10.45	□□□□□ -0.74
PPP1CA-206	ENST00000529724	DOCK4	Q8N1I0	1966 aa		10.45	□□□□□ -0.74
PPP1CA-206	ENST00000529724	FN1	P02751	2386 aa	Known RBP	10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	IGLV3-10	A0A075B6K4	115 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	SSU72P8	A0A1W2PR75	194 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724		E5RJQ4	531 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	ZNF185	O15231	689 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	CEACAM5	P06731	702 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	STS	P08842	583 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	ANKRD34C	P0C6C1	535 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	CCNYL3	P0C7X3	344 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	GM2A	P17900	193 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	NR2F2	P24468	414 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	HTR1E	P28566	365 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	PTPN4	P29074	926 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	ACVRL1	P37023	503 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	ACADSB	P45954	432 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	SUOX	P51687	545 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	YWHAE	P62258	255 aa	Known RBP	10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	SNRPD1	P62314	119 aa	Known RBP	10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	SH3BP2	P78314	561 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	CTBS	Q01459	385 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	PTK2	Q05397	1052 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	NME3	Q13232	169 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	MTA1	Q13330	715 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	STIL	Q15468	1287 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	TMEM270	Q6UE05	265 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	BNC2	Q6ZN30	1099 aa	Predicted RBP	10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	SYVN1	Q86TM6	617 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	FJX1	Q86VR8	437 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	KCNMB4	Q86W47	210 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	ADAMTS17	Q8TE56	1095 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	HDAC11	Q96DB2	347 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	HMCES	Q96FZ2	354 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	SLC38A3	Q99624	504 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	CHST11	Q9NPF2	352 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	GPR83	Q9NYM4	423 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	USP25	Q9UHP3	1055 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	LNPEP	Q9UIQ6	1025 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	PLEKHM1	Q9Y4G2	1056 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	PCDHGA10	Q9Y5H3	936 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	ATR	Q13535	2644 aa		10.44	□□□□□ -0.74
PPP1CA-206	ENST00000529724	FER1L5	A0AVI2	2057 aa		10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	FLNA	P21333	2647 aa	Known RBP	10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	CXorf51A	A0A1B0GTR3	108 aa		10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724		A6NL46	340 aa		10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	BUB1B	O60566	1050 aa	Predicted RBP	10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	SPAG6	O75602	509 aa		10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	RECQL5	O94762	991 aa	Predicted RBP	10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	TIAF1	O95411	115 aa		10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	LPO	P22079	712 aa	Predicted RBP	10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	MMP12	P39900	470 aa		10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	GNPDA1	P46926	289 aa		10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	NASP	P49321	788 aa	Predicted RBP	10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	GNA12	Q03113	381 aa		10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	SRSF11	Q05519	484 aa	Known RBP	10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	SLC39A14	Q15043	492 aa		10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	POLD3	Q15054	466 aa	Predicted RBP	10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	NFIL3	Q16649	462 aa		10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	CBWD6	Q4V339	395 aa		10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	CBWD3	Q5JTY5	395 aa		10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	CBWD5	Q5RIA9	395 aa		10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	FAM199X	Q6PEV8	388 aa	Predicted RBP	10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	TMEM110	Q86TL2	294 aa		10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	RASGRP3	Q8IV61	690 aa		10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	IQUB	Q8NA54	791 aa		10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	SLC37A2	Q8TED4	501 aa		10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	ELMO2	Q96JJ3	720 aa		10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	OR6C1	Q96RD1	312 aa		10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	GPR87	Q9BY21	358 aa		10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	GSX1	Q9H4S2	264 aa	Predicted RBP	10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	WDR26	Q9H7D7	661 aa		10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	COQ4	Q9Y3A0	265 aa		10.43	□□□□□ -0.74
PPP1CA-206	ENST00000529724	CNTRL	Q7Z7A1	2325 aa		10.42	□□□□□ -0.74
PPP1CA-206	ENST00000529724	TRBV23OR9-2	A0A075B6M9	112 aa		10.42	□□□□□ -0.74
PPP1CA-206	ENST00000529724		A0A1B0GUH1	482 aa		10.42	□□□□□ -0.74
PPP1CA-206	ENST00000529724	TSPAN11	A1L157	253 aa		10.42	□□□□□ -0.74
PPP1CA-206	ENST00000529724	TMEM200C	A6NKL6	621 aa		10.42	□□□□□ -0.74
PPP1CA-206	ENST00000529724		F5H423	210 aa	Predicted RBP	10.42	□□□□□ -0.74
PPP1CA-206	ENST00000529724	CALU	O43852	315 aa	Predicted RBP	10.42	□□□□□ -0.74
PPP1CA-206	ENST00000529724	EML2	O95834	649 aa		10.42	□□□□□ -0.74
PPP1CA-206	ENST00000529724	F9	P00740	461 aa		10.42	□□□□□ -0.74
PPP1CA-206	ENST00000529724	FGF5	P12034	268 aa		10.42	□□□□□ -0.74
PPP1CA-206	ENST00000529724	PSMC2	P35998	433 aa	Known RBP	10.42	□□□□□ -0.74
PPP1CA-206	ENST00000529724	ADCY8	P40145	1251 aa		10.42	□□□□□ -0.74
PPP1CA-206	ENST00000529724	PPM1F	P49593	454 aa	Predicted RBP	10.42	□□□□□ -0.74
PPP1CA-206	ENST00000529724	RALGDS	Q12967	914 aa		10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms